Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGCTCCCAAACCGCCTAGTACGGGTCTGTTTGTTGGACTGAACAAGGGTCACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttttcagttctttttttcaaatgtgattcagttatatgtttgcacctttttttagattgtaagtggtggtgttggaatcaaagtgtcatccaa...

Basic information

species Glycine max
transcript GLYMA20G29990.3
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|37996882|gb|CF808471.1|CF808471
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|254345346|gb|GR851615.1|GR851615
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|4313686|gb|AI460805.1|AI460805
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|213614950|gb|DB978355.1|DB978355
EST:     CCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: CCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|31458550|gb|CD400578.1|CD400578
EST:     CCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: CCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|254318893|gb|GR828729.1|GR828729
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|6719054|gb|AW306701.1|AW306701
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|209696803|gb|BW680424.1|BW680424
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|7283952|gb|AW596553.1|AW596553
EST:     ATGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCGGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|21887245|gb|BQ740458.1|BQ740458
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|10847478|gb|BF070160.1|BF070160
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|209701759|gb|BW655900.1|BW655900
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|20811927|gb|BQ296405.1|BQ296405
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|21600582|gb|BQ610913.1|BQ610913
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|213617726|gb|DB959366.1|DB959366
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|254318894|gb|GR828730.1|GR828730
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|16282379|gb|BI944985.1|BI944985
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|7030348|gb|AW460131.1|AW460131
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|209696804|gb|BW680425.1|BW680425
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|6718758|gb|AW306405.1|AW306405
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|192306596|gb|FG997252.1|FG997252
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|22933058|gb|BU550197.1|BU550197
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|14990627|gb|BI316300.1|BI316300
EST:     ACGTCGTCACCAATAAGGAATTGCCCCCACGCCCCTCATATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|298165984|gb|HO008955.1|HO008955
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|12691284|gb|BG157620.1|BG157620
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|12774562|gb|BG239489.1|BG239489
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|23733318|gb|BU764850.1|BU764850
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|12773058|gb|BG237985.1|BG237985
EST:     ACGTCGTCACCAA-AAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|4405693|gb|AI507842.1|AI507842
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|6718947|gb|AW306594.1|AW306594
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|7284867|gb|AW597354.1|AW597354
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|13791653|gb|BG654244.1|BG654244
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|31458362|gb|CD400390.1|CD400390
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|213593628|gb|DB977460.1|DB977460
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|6134997|gb|AW133390.1|AW133390
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|31469531|gb|CD411559.1|CD411559
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|58023808|gb|CX710549.1|CX710549
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|209725623|gb|BW663112.1|BW663112
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|22932776|gb|BU549915.1|BU549915
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|13790374|gb|BG652965.1|BG652965
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|10843396|gb|BF066695.1|BF066695
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|5057742|gb|AI736218.1|AI736218
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|209709264|gb|BW678683.1|BW678683
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|208078987|gb|GD876603.1|GD876603
EST:     ATGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCGGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|15287561|gb|BI471452.1|BI471452
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|213598081|gb|DB972269.1|DB972269
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|31462377|gb|CD404405.1|CD404405
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|213597801|gb|DB960358.1|DB960358
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|254326250|gb|GR840842.1|GR840842
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|6847676|gb|AW349966.1|AW349966
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|21600861|gb|BQ611192.1|BQ611192
EST:     GTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: GTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|23055198|gb|BU577661.1|BU577661
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|22932579|gb|BU549718.1|BU549718
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|10232615|gb|BE801503.1|BE801503
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|4313572|gb|AI460691.1|AI460691
EST:     ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: ACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
EST: gi|192298190|gb|FG992040.1|FG992040
EST:     AGATCGTAAGGGG                         AAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT
genomic: AGATCGTAAGGGGgtaagttttt ... ttcaaaacagAAAACAAGCAAGAGGGTGCACTTTGTGAGGAACCTCATAAGAGAGGTTGCT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GGCTCCCAAACCGCCTAGTACGGGTCTGTTTGTTGGACTGAACAAGGGTCACGTCGTCACCAAGAAGGAATTGCCCCCACGCCCCTCAGATCGTAAGGGGgtaagttttttcagttctttttttcaaatgtgattcagttatatgtttgcacctttttttagattgtaagtggtggtgttggaatcaaagtgtcatccaa

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAA