Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaaccatttaattaactatctttcctctgatcgtcactttcactccaaatgtcgtctaaactttttccttcttctcactccaaccag

Basic information

species Glycine max
transcript GLYMA20G28320.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209721633|gb|BW671748.1|BW671748
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|254346033|gb|GR855160.1|GR855160
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|6134598|gb|AW132991.1|AW132991
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|7458621|gb|AW666071.1|AW666071
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|192330976|gb|FK021675.1|FK021675
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|21994433|gb|BQ785961.1|BQ785961
EST:     GCACTAGGNCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGGTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|209705549|gb|BW683579.1|BW683579
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|15001049|gb|BI321863.1|BI321863
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|254344895|gb|GR851378.1|GR851378
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|7691481|gb|AW759608.1|AW759608
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|254343068|gb|GR859230.1|GR859230
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|23734136|gb|BU765291.1|BU765291
EST:     GTTTAAGAGCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GTTTAAGAGCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|15286177|gb|BI470068.1|BI470068
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|21994650|gb|BQ786178.1|BQ786178
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|10231362|gb|BE800250.1|BE800250
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|9564983|gb|BE474492.1|BE474492
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|7924108|gb|AW830134.1|AW830134
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|5770593|gb|AI973767.1|AI973767
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|254349048|gb|GR860320.1|GR860320
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|23729484|gb|BU762832.1|BU762832
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|209722810|gb|BW669404.1|BW669404
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|213617239|gb|DB965166.1|DB965166
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|10847500|gb|BF070178.1|BF070178
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|16995575|gb|BM084947.1|BM084947
EST:     CCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: CCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|213616525|gb|DB965558.1|DB965558
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|6566982|gb|AW234609.1|AW234609
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|19348584|gb|BM893116.1|BM893116
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|192298814|gb|FG991035.1|FG991035
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|5770742|gb|AI973916.1|AI973916
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|17519365|gb|BM188407.1|BM188407
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|10239012|gb|BE807900.1|BE807900
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|16995950|gb|BM085322.1|BM085322
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|213611311|gb|DB972740.1|DB972740
EST:     GCACTAGGCCATGATATCACCACAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|16347433|gb|BI973028.1|BI973028
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|15816140|gb|BI788415.1|BI788415
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|151412395|gb|EV282207.1|EV282207
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|213591333|gb|DB955709.1|DB955709
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|4313511|gb|AI460630.1|AI460630
EST:     GATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|213598806|gb|DB968277.1|DB968277
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|9819319|gb|BE554832.1|BE554832
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|5606395|gb|AI900549.1|AI900549
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|17023364|gb|BM094398.1|BM094398
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|213597914|gb|DB958295.1|DB958295
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|14125734|gb|BG790172.1|BG790172
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|213595830|gb|DB955950.1|DB955950
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|17519396|gb|BM188438.1|BM188438
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|7478419|gb|AW666258.1|AW666258
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|209701902|gb|BW661342.1|BW661342
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|7233996|gb|AW569337.1|AW569337
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|7691526|gb|AW759652.1|AW759652
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|8284665|gb|BE022287.1|BE022287
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|15815384|gb|BI787659.1|BI787659
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|16347489|gb|BI973084.1|BI973084
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TGTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|22521852|gb|BU080663.1|BU080663
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|16996150|gb|BM085522.1|BM085522
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|21887301|gb|BQ740514.1|BQ740514
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|209714943|gb|BW650789.1|BW650789
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|213607296|gb|DB957132.1|DB957132
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|4437111|gb|AI522976.1|AI522976
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|213601663|gb|DB972399.1|DB972399
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|209708873|gb|BW661813.1|BW661813
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|14126013|gb|BG790451.1|BG790451
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|21995108|gb|BQ786636.1|BQ786636
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|9264515|gb|BE352662.1|BE352662
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|19935195|gb|BQ080225.1|BQ080225
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|7926204|gb|AW832230.1|AW832230
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|15664802|gb|BI702181.1|BI702181
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|193629491|gb|FK575947.1|FK575947
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|209724421|gb|BW662952.1|BW662952
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|13252755|gb|BG363658.1|BG363658
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|192305012|gb|FG996130.1|FG996130
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTGCCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
EST: gi|8284673|gb|BE022215.1|BE022215
EST:     GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGG                         TTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT
genomic: GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaacca ... ctccaaccagTTTCGTGCACGGAAGGCTACCTTACGACTCCATCAACCCTGATCATCACTT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GCACTAGGCCATGATATCACCGCAGAGGAGTACCATGGgtgagaaccatttaattaactatctttcctctgatcgtcactttcactccaaatgtcgtctaaactttttccttcttctcactccaaccag

- - - - - - - - - - -  AGAGGA
- - - - - - - - - - - - GAGGAG