1 5' 3' |
CGACGCGCCTGCCAACACGAGTGTTGGGTGGAGGGACCCTGGGTTTATCCACGACGCCGTTCTCATAGGTTTGAAGAAGGGACAGAGGTATTATTACAAGgtaataatgactaataacgttcttttattacatattaagttttgaaaaaaaaaatcttataatcaagatcaaagggagtaggtagttgttagtttttatt...
species | Glycine max |
transcript | GLYMA20G03260.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GTTCTCATAGGTTTGAAGAAGGGACAGAGGTATTATTACAAG GTTGGAAATGATAACGGAGGTTGGAGTGCAACTCAAAGTTTTGTGTCGAGGEST: gi|9566019|gb|BE475590.1|BE475590
genomic: GTTCTCATAGGTTTGAAGAAGGGACAGAGGTATTATTACAAGgtaataatga ... tatgtaccagGTTGGAAATGATAACGGAGGTTGGAGTGCAACTCAAAGTTTTGTGTCGAGG
EST: ACGACGCCGTTCTCATAGGTTTGAAGAAGGGACAGAGGTATTATTACAAG GTTGGAAATGATAACGGAGGTTGGAGTGCAACTCAAAGTTTTGTGTCGAGG
genomic: ACGACGCCGTTCTCATAGGTTTGAAGAAGGGACAGAGGTATTATTACAAGgtaataatga ... tatgtaccagGTTGGAAATGATAACGGAGGTTGGAGTGCAACTCAAAGTTTTGTGTCGAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGACGCGCCTGCCAACACGAGTGTTGGGTGGAGGGACCCTGGGTTTATCCACGACGCCGTTCTCATAGGTTTGAAGAAGGGACAGAGGTATTATTACAAGgtaataatgactaataacgttcttttattacatattaagttttgaaaaaaaaaatcttataatcaagatcaaagggagtaggtagttgttagtttttatt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaaaaaa