1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
...taagatctacccactcctctccacctcaaaaaaacggtggaggtaacaaattattggtaactgtctttgcttttttgtttacttttcactaatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGGCTGCAAAACATGAAGATAAAGCTGATTGTGTTGGCGATTTTGATAGCC
species | Glycine max |
transcript | GLYMA20G02720.4 |
intron # | 4 |
splice site | 3' |
intron type | U2 |
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193496423|gb|FK459013.1|FK459013
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGEST: gi|208170928|gb|GD969267.1|GD969267
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTEST: gi|193583891|gb|FK542867.1|FK542867
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATT
EST: AAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208148135|gb|GD949737.1|GD949737
genomic: AAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGEST: gi|193724016|gb|FK658802.1|FK658802
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCEST: gi|193406243|gb|FK373480.1|FK373480
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTC
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCEST: gi|208174145|gb|GD968624.1|GD968624
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTC
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208300087|gb|GE097206.1|GE097206
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: TTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208183980|gb|GD983686.1|GD983686
genomic: TTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATEST: gi|207825578|gb|GD797289.1|GD797289
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAAT
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208310339|gb|GE107673.1|GE107673
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACC-G G--G-CACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193693214|gb|FK633763.1|FK633763
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGAAAANATAGAGCTTCTGGTTGAACAAAACTGAAAATCTTCATCACCAG GCAGGCACAAGEST: gi|207704382|gb|GD686625.1|GD686625
genomic: GGAAAAGATAGAGCTTCTGGTTGA-CAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193711341|gb|FK643908.1|FK643908
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|207681989|gb|GD662512.1|GD662512
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193426410|gb|FK386581.1|FK386581
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208025885|gb|GD824353.1|GD824353
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|207764891|gb|GD737138.1|GD737138
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCCGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCEST: gi|193631355|gb|FK583732.1|FK583732
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTC
EST: GG-AAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGEST: gi|207778255|gb|GD748398.1|GD748398
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGEST: gi|208074041|gb|GD872018.1|GD872018
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193698400|gb|FK641557.1|FK641557
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAEST: gi|207756135|gb|GD727034.1|GD727034
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAA
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTEST: gi|207803764|gb|GD772205.1|GD772205
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATT
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCAA-CA-AAGACTTCAGGAATTCTGGGEST: gi|193378650|gb|FK343843.1|FK343843
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTEST: gi|193336633|gb|FK304483.1|FK304483
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATT
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208273061|gb|GE068373.1|GE068373
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: CTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|207755967|gb|GD728000.1|GD728000
genomic: CTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193669026|gb|FK614048.1|FK614048
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGAAAAGGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193515311|gb|FK472873.1|FK472873
genomic: GGAAAA-GATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193385164|gb|FK352318.1|FK352318
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193536950|gb|FK492332.1|FK492332
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|207843079|gb|GD815589.1|GD815589
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGAAAAGATAGAGCTTCTGGTTGACTAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193488537|gb|FK454442.1|FK454442
genomic: GGAAAAGATAGAGCTTCTGGTTGAC-AAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|58014462|gb|CX701204.1|CX701204
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193493629|gb|FK458811.1|FK458811
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208066372|gb|GD863091.1|GD863091
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208294512|gb|GE094303.1|GE094303
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193677615|gb|FK616217.1|FK616217
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATEST: gi|208293959|gb|GE090782.1|GE090782
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAAT
EST: CTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193720164|gb|FK655308.1|FK655308
genomic: CTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCA- --AG-CACAAGACTTCAGGEST: gi|208165503|gb|GD961615.1|GD961615
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208178812|gb|GD975293.1|GD975293
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193466757|gb|FK432136.1|FK432136
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|7285239|gb|AW597726.1|AW597726
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193420459|gb|FK390466.1|FK390466
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|207694792|gb|GD677967.1|GD677967
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193406482|gb|FK371787.1|FK371787
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: ACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193401305|gb|FK367532.1|FK367532
genomic: ACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193307901|gb|FK271545.1|FK271545
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208292853|gb|GE094633.1|GE094633
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA---ACAAGACTTCAGGEST: gi|151401881|gb|EV271694.1|EV271694
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|58015276|gb|CX702018.1|CX702018
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193333395|gb|FK297409.1|FK297409
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208133105|gb|GD928728.1|GD928728
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|193534096|gb|FK489867.1|FK489867
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: TAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GTCA-GCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTEST: gi|193412740|gb|FK376963.1|FK376963
genomic: TAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagG-CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGT
EST: AACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208214183|gb|GE014572.1|GE014572
genomic: AACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|207714687|gb|GD695969.1|GD695969
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: TGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAATATGTGEST: gi|207683974|gb|GD667447.1|GD667447
genomic: TGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208119999|gb|GD918380.1|GD918380
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208252227|gb|GE046603.1|GE046603
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACC-G G--G-CACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208072048|gb|GD871506.1|GD871506
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|207795290|gb|GD764453.1|GD764453
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208135982|gb|GD936281.1|GD936281
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208143983|gb|GD941586.1|GD941586
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGAAAAGATAGAGCTTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|192327642|gb|FK021319.1|FK021319
genomic: GGAAAAGATAGAGC-TTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|7639920|gb|AW734232.1|AW734232
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208312055|gb|GE109879.1|GE109879
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208087131|gb|GD887179.1|GD887179
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208119998|gb|GD918379.1|GD918379
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|192331324|gb|FK021021.1|FK021021
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208140236|gb|GD934816.1|GD934816
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: CTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|208200608|gb|GD995167.1|GD995167
genomic: CTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCA-C-- -CAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGEST: gi|207801237|gb|GD773349.1|GD773349
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTG
EST: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAG GCA--CA-A-GACTTACAGGAATTCTGGGAC
genomic: GGGAAAAGATAGAGCTTCTGGTTGACAAAACTGAAAATCTTCATCACCAGgtcagttcat ... aatttttgagGCAGGCACAAGACTT-CAGGAATTCTGGGAC
acaaattattggtaactgtctttgcttttttgtttacttttcactaatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGGCTGCAAAACATGAAGATAAAGCTGATTGTGTTGGCGATTTTGATAGCC
cactaat putative branch site (score: 2)
ttttt CT-rich tract
ttttttgtttactttt TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| taagatctacccactcctctccacctcaaaaaaacggtggaggtaacaaattattggtaactgtctttgcttttttgtttacttttcactaatttttgagGCAGGCACAAGACTTCAGGAATTCTGGGACCAAAATTCGTAGAAAAATGTGGCTGCAAAACATGAAGATAAAGCTGATTGTGTTGGCGATTTTGATAGCC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT
- - - - -cccactc
- - - - - - - - - ctccacc
- - - - - - - - - - - - - -aaaaaaa
- - - - - - - - - - - - - - - - - -ggtggag
- - - - - - - - - - - - - - - - - - - - - gtaacaaa