1 5' 3' | 2 5' 3' | 3 5' 3' |
TTTCAAGTGCTCAAACCGTAGATATTCAGAGAGGAACCACGTTGTTTCGTCAAGCTTGTATTGGATGCCATGATGCAGGTGGAAACATAATACAACCGgtgagtatccccttatgcatgacatttctttatttttttttctttttaaactgaaattaatttgttctttcttccttattcttcctattttaacttacaa...
species | Glycine max |
transcript | GLYMA20G02550.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTCAAGCTTGTATTGGATGCCATGATGCAGGTGGAAACATAATACAACCG GGCTTTGGTAAAGAGTGCATGCCACGGGGTCAGTGCACATTTGGAGCTCGTEST: gi|209700280|gb|BW664506.1|BW664506
genomic: GTCAAGCTTGTATTGGATGCCATGATGCAGGTGGAAACATAATACAACCGgtgagtatcc ... ttgcttgcagGGCTTTGGTAAAGAGTGCATGCCACGGGGTCAGTGCACATTTGGAGCTCGT
EST: GTCAAGCTTGTATTGGATGCCATGATGCAGGTGGAAACATAATACAACCG GGCTTTGGTAAAGAGTGCATGCCACGGGGTCAGTGCACATTTGGAGCTCGT
genomic: GTCAAGCTTGTATTGGATGCCATGATGCAGGTGGAAACATAATACAACCGgtgagtatcc ... ttgcttgcagGGCTTTGGTAAAGAGTGCATGCCACGGGGTCAGTGCACATTTGGAGCTCGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTCAAGTGCTCAAACCGTAGATATTCAGAGAGGAACCACGTTGTTTCGTCAAGCTTGTATTGGATGCCATGATGCAGGTGGAAACATAATACAACCGgtgagtatccccttatgcatgacatttctttatttttttttctttttaaactgaaattaatttgttctttcttccttattcttcctattttaacttacaa
- - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tcccctt