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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

...gttttataatattttgtatatagtgttgtcataaaagtagtatgaaaaactgattaatatacattgttaatcttttacttttccctaccgtattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGCATGAAATCGCAAATCACACACTTCAACTTTACAGGGTAGACACATTGGC

Basic information

species Glycine max
transcript GLYMA20G02250.3
intron # 3
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|18039018|gb|BM307312.1|BM307312
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|58023963|gb|CX710704.1|CX710704
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|9984033|gb|BE658141.1|BE658141
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298196778|gb|HO041521.1|HO041521
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGGGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298186399|gb|HO037032.1|HO037032
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|192326089|gb|FK016241.1|FK016241
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298176829|gb|HO023302.1|HO023302
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|192300181|gb|FG989303.1|FG989303
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGG
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTT-AGCTGGAGGTATATTTGGGTGGACTTTTGGG
EST: gi|213594258|gb|DB969964.1|DB969964
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298189915|gb|HO038318.1|HO038318
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151411394|gb|EV281205.1|EV281205
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTTGGGTGGACTTTTGGG
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTT-GGGTGGACTTTTGGG
EST: gi|298196064|gb|HO044455.1|HO044455
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298180813|gb|HO022252.1|HO022252
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|12773868|gb|BG238795.1|BG238795
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|58023111|gb|CX709852.1|CX709852
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|192326018|gb|FK016200.1|FK016200
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|7030299|gb|AW460082.1|AW460082
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151400953|gb|EV270767.1|EV270767
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCAGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|192297704|gb|FG989594.1|FG989594
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|192328392|gb|FK020103.1|FK020103
EST:     AGCATTATTTACTGCAGGCTATGCCCGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151413273|gb|EV283081.1|EV283081
EST:     AGCATTATTTACTGCAGGCTATGCCCGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298192922|gb|HO033356.1|HO033356
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151407348|gb|EV277163.1|EV277163
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151411906|gb|EV281717.1|EV281717
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|31311039|gb|CD396242.1|CD396242
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|4290003|gb|AI441556.1|AI441556
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|38191065|gb|CF920271.1|CF920271
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|192317710|gb|FK008602.1|FK008602
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|192298857|gb|FG987602.1|FG987602
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298170171|gb|HO018795.1|HO018795
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298169734|gb|HO021094.1|HO021094
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151410280|gb|EV280095.1|EV280095
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|209726947|gb|BW680276.1|BW680276
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|4303689|gb|AI443512.1|AI443512
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|58024151|gb|CX710892.1|CX710892
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|58023141|gb|CX709882.1|CX709882
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|192326830|gb|FK015102.1|FK015102
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|6847047|gb|AW349337.1|AW349337
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|21889812|gb|BQ743025.1|BQ743025
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|213617808|gb|DB959392.1|DB959392
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298185838|gb|HO030999.1|HO030999
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151405812|gb|EV275627.1|EV275627
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|16347857|gb|BI973452.1|BI973452
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298184275|gb|HO029488.1|HO029488
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298164242|gb|HO013887.1|HO013887
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298194227|gb|HO040875.1|HO040875
EST:     AGCATTATTTACTGCAGGCTACGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|193642681|gb|FK593351.1|FK593351
EST:     TATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: TATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|58016067|gb|CX702809.1|CX702809
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|213587971|gb|DB971446.1|DB971446
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTTGGGTGGACTTTTGGG
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTT-GGGTGGACTTTTGGG
EST: gi|254338822|gb|GR847539.1|GR847539
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298179762|gb|HO024977.1|HO024977
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|6502166|gb|AW203539.1|AW203539
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298190666|gb|HO032787.1|HO032787
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTT-AGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298163655|gb|HO012388.1|HO012388
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|193523857|gb|FK482232.1|FK482232
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|4395857|gb|AI494854.1|AI494854
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTAT
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTAT
EST: gi|298173259|gb|HO020243.1|HO020243
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|208024175|gb|GD823777.1|GD823777
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAATGAGTTTACATG                         GCGCTGGACTGTCATTTTTAG
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAG
EST: gi|214006862|gb|DB988369.1|DB988369
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151407497|gb|EV277312.1|EV277312
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151412014|gb|EV281825.1|EV281825
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151396359|gb|EV266236.1|EV266236
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|7234337|gb|AW569676.1|AW569676
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|192305829|gb|FG995421.1|FG995421
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|19453348|gb|BM954758.1|BM954758
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|58016066|gb|CX702808.1|CX702808
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151405553|gb|EV275367.1|EV275367
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|192317711|gb|FK008603.1|FK008603
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151406805|gb|EV276620.1|EV276620
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|254333478|gb|GR848396.1|GR848396
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|298169572|gb|HO020932.1|HO020932
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
EST: gi|151399940|gb|EV269811.1|EV269811
EST:     AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATG                         GCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC
genomic: AGCATTATTTACTGCAGGCTATGCCTGGAAATATTCAAAGAGTTTACATGgtaatctacc ... tattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGC


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

aaaactgattaatatacattgttaatcttttacttttccctaccgtattaaacagGCGCTGGACTGTCATTTTTAGCTGGAGGTATATTTGGGTGGACTTTTGGGCATGAAATCGCAAATCACACACTTCAACTTTACAGGGTAGACACATTGGC
                   tgttaat  putative branch site (score: 3)
                         tcttttacttttccct  CT-rich tract
       attaatatacattgtt  TA-rich tract