Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|192315420|gb|FK009656.1|FK009656EST: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGG GTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
genomic: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGGgtatttgttt ... aatgtctcagGTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
EST:
gi|19348411|gb|BM892943.1|BM892943EST: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGG GTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
genomic: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGGgtatttgttt ... aatgtctcagGTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
EST:
gi|31308246|gb|CD393449.1|CD393449EST: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGG GTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
genomic: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGGgtatttgttt ... aatgtctcagGTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
EST:
gi|151407002|gb|EV276817.1|EV276817EST: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGG GTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
genomic: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGGgtatttgttt ... aatgtctcagGTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
EST:
gi|192297288|gb|FG992397.1|FG992397EST: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGG GTGATAAATCTTCAACGGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
genomic: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGGgtatttgttt ... aatgtctcagGTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
EST:
gi|17022550|gb|BM093584.1|BM093584EST: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGG GTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
genomic: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGGgtatttgttt ... aatgtctcagGTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
EST:
gi|151398588|gb|EV268459.1|EV268459EST: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGG GTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
genomic: CAACAGAGACTCCAAGGAATCTCAACGAAACGACGATAACAATAACAAGGgtatttgttt ... aatgtctcagGTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGC
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.aaaacaagtgtagaactgacgaccacttattataattgttggtcaaatgtctcagGTGATAAATCTTCAACAGACTGGGACAAGGCATGGTCAAAATTCAAAAAGCAAGGGGGAAAAAAACCCTTCTCCAAATTTTCAGATAAGTATGTGAGCTG
aactgac putative branch site (score: 2)
acttattataattgtt TA-rich tract