1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTCCGCTCTCCGATATTCAGAAGAAGATGCGCCGCGCCGAGCGATTCGGCATTTCCGTCCAGTTGTCCGAGAAAGAGAAGCGCAATTCCCGAGCCGAAAGgtccattccaaatcatcactattttatctatctattcatgtgttgatttggatgccctagtaatttatgtgtgtctcaatttaacattttctctacatgcag
species | Glycine max |
transcript | GLYMA19G36050.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATTTCCGTCCAGTTGTCCGAGAAAGAGAAGCGCAATTCCCGAGCCGAAAG ATTTGGCACTGTCTCCGCATCGCAGGGATCAGAGCCATCAAAATCGGAGGAEST: gi|254332536|gb|GR846474.1|GR846474
genomic: ATTTCCGTCCAGTTGTCCGAGAAAGAGAAGCGCAATTCCCGAGCCGAAAGgtccattcca ... ctacatgcagATTTGGCACTGTCTCCGCATCGCAGGGATCAGAGCCATCAAAATCGGAGGA
EST: ATTTCCGTCCAGTTGTCCGAGAAAGAGAAGCGCAATTCCCGAGCCGAAAG ATTTGGCACTGTCTCCGCATCGCAGG-ATCAGAGCCATCAAAATCGGAGGA
genomic: ATTTCCGTCCAGTTGTCCGAGAAAGAGAAGCGCAATTCCCGAGCCGAAAGgtccattcca ... ctacatgcagATTTGGCACTGTCTCCGCATCGCAGGGATCAGAGCCATCAAAATCGGAGGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTCCGCTCTCCGATATTCAGAAGAAGATGCGCCGCGCCGAGCGATTCGGCATTTCCGTCCAGTTGTCCGAGAAAGAGAAGCGCAATTCCCGAGCCGAAAGgtccattccaaatcatcactattttatctatctattcatgtgttgatttggatgccctagtaatttatgtgtgtctcaatttaacattttctctacatgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC