1 5' 3' | 2 5' 3' | 3 5' 3' |
gttatttttcaattttcaactcgcacctttttccttcgtttatttatttatgtgactcttggtagcacagGATTGATTATATCTGCGGACGTGACGCTGAGCTCGATTGAGATCTTCACAACCCACGAGTTTCTTAAAGCCACTCCAACTGTCTATTTTCTGTGCAAAGG
species | Glycine max |
transcript | GLYMA19G36000.1 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: CAATTCTCTTCTCCTTCTTTTCTCCTCCATATTCCTCACCTATTTCCCAG GATTGATTATATCTGCGGACGTGACGCTGAGCTCGATTGAGATCTTCACAAEST: gi|151402535|gb|EV272348.1|EV272348
genomic: CAATTCTCTTCTCCTTCTTTTCTCCTCCATATTCCTCACCTATTTCCCAGgttatttttc ... ggtagcacagGATTGATTATATCTGCGGACGTGACGCTGAGCTCGATTGAGATCTTCACAA
EST: CAATTCTCTTCTCCTTCTTTTCTCCTCCATATTCCTCACCTATTTCCCAG GATTGATTATATCTGCGGACGTGACGCTGAGCTCGATTGAGATCTTCACAA
genomic: CAATTCTCTTCTCCTTCTTTTCTCCTCCATATTCCTCACCTATTTCCCAGgttatttttc ... ggtagcacagGATTGATTATATCTGCGGACGTGACGCTGAGCTCGATTGAGATCTTCACAA
tcaactcgcacctttttccttcgtttatttatttatgtgactcttggtagcacagGATTGATTATATCTGCGGACGTGACGCTGAGCTCGATTGAGATCTTCACAACCCACGAGTTTCTTAAAGCCACTCCAACTGTCTATTTTCTGTGCAAAGG
ttcgtttatttattta TA-rich tract
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| gttatttttcaattttcaactcgcacctttttccttcgtttatttatttatgtgactcttggtagcacagGATTGATTATATCTGCGGACGTGACGCTGAGCTCGATTGAGATCTTCACAACCCACGAGTTTCTTAAAGCCACTCCAACTGTCTATTTTCTGTGCAAAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG