Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCGAGGACGGAGTTATTCACGCTCACCAGTCAGGTCACGTTCACCTCATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgatttcattgtccagaattcttatgtatgtgttgcagtgatgcagcaagttttcacatttttgtttgtaaaaatcttatcttgtatgctgagttttgggtgcctttggccttgctag

Basic information

species Glycine max
transcript GLYMA19G35980.5
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|207848176|gb|GD817899.1|GD817899
EST:     CGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193549805|gb|FK507500.1|FK507500
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|207814779|gb|GD789024.1|GD789024
EST:     ATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: ATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208116085|gb|GD919506.1|GD919506
EST:     CCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193417901|gb|FK383411.1|FK383411
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTTGTCAGAAGAGAAGAA-GCCCTGTTCGGGAAGATA
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCT-GTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATA
EST: gi|193546351|gb|FK501786.1|FK501786
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208231288|gb|GE029403.1|GE029403
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGGGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|207711875|gb|GD693689.1|GD693689
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193719199|gb|FK653449.1|FK653449
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193328967|gb|FK295211.1|FK295211
EST:     CATCGCGGCGGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208068510|gb|GD862356.1|GD862356
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193427745|gb|FK394401.1|FK394401
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGGTCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAA
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAA
EST: gi|208178041|gb|GD976468.1|GD976468
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGTAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193601147|gb|FK551258.1|FK551258
EST:     CCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|207776528|gb|GD747428.1|GD747428
EST:     AAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: AAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208054942|gb|GD853631.1|GD853631
EST:     TTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: TTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208263419|gb|GE063329.1|GE063329
EST:     GACGGACAAGAAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: G-CGG-CA-GAA-GCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193490322|gb|FK453333.1|FK453333
EST:     CCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|151408470|gb|EV278278.1|EV278278
EST:     TCGCGGCAGAAGCCGTGATCGCAGTTACAGCCAAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: TCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|17023537|gb|BM094571.1|BM094571
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193500363|gb|FK464384.1|FK464384
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193326233|gb|FK291456.1|FK291456
EST:     TTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: TTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193479319|gb|FK445000.1|FK445000
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAAGAAAGCCCTGTTCGGGAAGATA
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAA-GAAAGCCCTGTTCGGGAAGATA
EST: gi|208217616|gb|GE014794.1|GE014794
EST:     CCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208159843|gb|GD956627.1|GD956627
EST:     CAGCCGGGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208280570|gb|GE080936.1|GE080936
EST:     CGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193541256|gb|FK498756.1|FK498756
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193704282|gb|FK644760.1|FK644760
EST:     TCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: TCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|209715287|gb|BW654174.1|BW654174
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGA
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGA
EST: gi|151410994|gb|EV280809.1|EV280809
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCAAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|207681316|gb|GD663855.1|GD663855
EST:     AGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: AGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|207720304|gb|GD704021.1|GD704021
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGT
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGT
EST: gi|207788796|gb|GD761152.1|GD761152
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193556594|gb|FK515247.1|FK515247
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAA-GCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208283896|gb|GE089008.1|GE089008
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGTAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208310049|gb|GE109343.1|GE109343
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193611582|gb|FK560843.1|FK560843
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208185972|gb|GD986741.1|GD986741
EST:     CGTCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208148323|gb|GD950681.1|GD950681
EST:     TTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: TTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208195865|gb|GD994426.1|GD994426
EST:     CGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|207806975|gb|GD778850.1|GD778850
EST:     TTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: TTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|207823932|gb|GD794607.1|GD794607
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208310747|gb|GE106401.1|GE106401
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193394302|gb|FK358993.1|FK358993
EST:     CATCGCGGCAGAAGCCGTGATCACAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193565947|gb|FK523680.1|FK523680
EST:     CGCAGTTACAGACCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CGCAGTTACAG-CCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193702910|gb|FK638782.1|FK638782
EST:     ATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: ATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|207828745|gb|GD800870.1|GD800870
EST:     CGGCAGAAGCCGTTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CGGCAGAAGCCG-TGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|193361722|gb|FK328270.1|FK328270
EST:     CCGAGATCGCAGCTACAG                         TCGATCACGAT-CCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGAAAGATAG
genomic: CCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|207809566|gb|GD781402.1|GD781402
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|207802564|gb|GD774435.1|GD774435
EST:     TTACAGCCGAGACCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGGAGAAAGCCCTGTTCGGGAAGATAG
genomic: TTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|26058518|gb|CA801432.1|CA801432
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|58015478|gb|CX702220.1|CX702220
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208033541|gb|GD830920.1|GD830920
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAA-GCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208292602|gb|GE091624.1|GE091624
EST:     CGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
genomic: CGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG
EST: gi|208338503|gb|GE137775.1|GE137775
EST:     CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAG                         TCGATCACGATCCCCTGTCAGAAGAGAANAAAGCCCTGTTCGGGAAGATAG
genomic: CATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgat ... gccttgctagTCGATCACGATCCCCTGTCAGAAGAGAAGAAAGCCCTGTTCGGGAAGATAG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
GCGAGGACGGAGTTATTCACGCTCACCAGTCAGGTCACGTTCACCTCATCGCGGCAGAAGCCGTGATCGCAGTTACAGCCGAGATCGCAGCTACAGgtaggatgatttcattgtccagaattcttatgtatgtgttgcagtgatgcagcaagttttcacatttttgtttgtaaaaatcttatcttgtatgctgagttttgggtgcctttggccttgctag

- - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAGCT