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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AAATAACGGACCGGGAATTGCGAGCCTACGATGGCTCCGACCCCAGCAAACCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCAGgtactccgcatttagttatatttgcatttttactaaatgttcacttgatttctaagtaatttataatcttgattattattggatatatagttagctgatc...

Basic information

species Glycine max
transcript GLYMA19G15780.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9204224|gb|BE330448.1|BE330448
EST:     CCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCAG                         GAATTTTTATGGTCCCGGAGGACCATATGCAATGTTTGCAGGAAAGGAATG
genomic: CCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCAGgtactccgca ... atatattcagGAATTTTTATGGTCCCGGAGGACCATATGCAATGTTTGCAGGAAAGGAATG
EST: gi|51336038|gb|CO979904.1|CO979904
EST:     CCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCAG                         GAATTTTTATGGTCCCGGAGGACCATATGCAATGTTTGCAGGAAAGGAATG
genomic: CCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCAGgtactccgca ... atatattcagGAATTTTTATGGTCCCGGAGGACCATATGCAATGTTTGCAGGAAAGGAATG
EST: gi|192303715|gb|FG998669.1|FG998669
EST:     CCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCGG                         GAATTTTTATGGTCCCGGAGGACCATATGCAATGTTTGCAGGAAAGGAATG
genomic: CCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCAGgtactccgca ... atatattcagGAATTTTTATGGTCCCGGAGGACCATATGCAATGTTTGCAGGAAAGGAATG
EST: gi|51345312|gb|CO986045.1|CO986045
EST:     CCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCAG                         GAATTTTTATGGTCCCGGAGGACCATATGCAATGTTTGCAGGAAAGGAATG
genomic: CCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCAGgtactccgca ... atatattcagGAATTTTTATGGTCCCGGAGGACCATATGCAATGTTTGCAGGAAAGGAATG
EST: gi|298170162|gb|HO018786.1|HO018786
EST:     CCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCAG                         GAATTTTTATGGTCCCGGAGGACCATATGCAATGTTTGCAGGAAAGGAATG
genomic: CCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCAGgtactccgca ... atatattcagGAATTTTTATGGTCCCGGAGGACCATATGCAATGTTTGCAGGAAAGGAATG
EST: gi|16347942|gb|BI973537.1|BI973537
EST:     CCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCAG                         GAATTTTTATGGTCCCGGAGGACCATATGCAATGTTTGCAGGAAAGGAATG
genomic: CCCCTCCTGATGGCAATCAAAGGCCAGATCTATGACGTGTCCAATGGCAGgtactccgca ... atatattcagGAATTTTTATGGTCCCGGAGGACCATATGCAATGTTTGCAGGAAAGGAATG