Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|18733532|gb|BM527664.1|BM527664EST: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTG GACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
genomic: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTGgtaaacatat ... gcttgaacagGACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
EST:
gi|151395508|gb|EV265385.1|EV265385EST: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTG GACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
genomic: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTGgtaaacatat ... gcttgaacagGACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
EST:
gi|10236183|gb|BE805071.1|BE805071EST: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTG GACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
genomic: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTGgtaaacatat ... gcttgaacagGACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
EST:
gi|192295934|gb|FG990930.1|FG990930EST: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTG GACTTAAACGTACTGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
genomic: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTGgtaaacatat ... gcttgaacagGACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
EST:
gi|8401736|gb|BE057370.1|BE057370EST: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTG GACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
genomic: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTGgtaaacatat ... gcttgaacagGACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
EST:
gi|6951890|gb|AW423958.1|AW423958EST: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTG GACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
genomic: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTGgtaaacatat ... gcttgaacagGACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
EST:
gi|18733261|gb|BM527508.1|BM527508EST: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTG GACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
genomic: TATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTGgtaaacatat ... gcttgaacagGACTTAAACGTACCGGAAAGAGTTGCCGGCTCCGGTGGCTAAACTACCTCC
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
GTGAGAAAGGGGCCATGGACAATGGAAGAAGACTTAATCTTGATCACCTATATTGCCAATCACGGGGAAGGGGTTTGGAACTCTTTGGCCAAGGCTGCTGgtaaacatatttttcattctcttcaaccttttttatttattattctttgagtattctctttctattttcttcttcttctttttctttcgttccaactaaagccctaggccagagatatgactcatcatgcttgaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT