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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGGCCCGATGAGTTGATGAGAATCGAAGAGGCTGGTGGAAGGGTCATTAACTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAGgttagtttgaacattcaattcttcatattcactatactgctggttgctaatattaaattattaatcgttaactaagaccttttaatggtgtttcttcggt...

Basic information

species Glycine max
transcript GLYMA19G11770.2
intron # 2
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|11274524|gb|BF324877.1|BF324877
EST:     CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCCTAG                         GAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
genomic: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAGgttagtttga ... actgatgcagGAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
EST: gi|22931994|gb|BU549133.1|BU549133
EST:     CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAG                         GAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
genomic: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAGgttagtttga ... actgatgcagGAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
EST: gi|207818055|gb|GD793068.1|GD793068
EST:     CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAG                         GAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
genomic: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAGgttagtttga ... actgatgcagGAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
EST: gi|208049984|gb|GD846271.1|GD846271
EST:     CAGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAG                         GAGATCAGTACCTTCGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
genomic: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAGgttagtttga ... actgatgcagGAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
EST: gi|193597911|gb|FK552383.1|FK552383
EST:     CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAG                         GAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
genomic: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAGgttagtttga ... actgatgcagGAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA