Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|11274524|gb|BF324877.1|BF324877EST: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCCTAG GAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
genomic: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAGgttagtttga ... actgatgcagGAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
EST:
gi|22931994|gb|BU549133.1|BU549133EST: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAG GAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
genomic: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAGgttagtttga ... actgatgcagGAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
EST:
gi|207818055|gb|GD793068.1|GD793068EST: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAG GAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
genomic: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAGgttagtttga ... actgatgcagGAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
EST:
gi|208049984|gb|GD846271.1|GD846271EST: CAGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAG GAGATCAGTACCTTCGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
genomic: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAGgttagtttga ... actgatgcagGAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
EST:
gi|193597911|gb|FK552383.1|FK552383EST: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAG GAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
genomic: CTGGAATGGCCAGCGCGTGCTTGGTGTTCTTGCCACTTCACGATCCATAGgttagtttga ... actgatgcagGAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGA
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
tttttttttttttgtagttacatttaattccatgacatcataccattactgctccaatttctctcctgtccgttctgactgtgtaatttgactgatgcagGAGATCAGTACCTTAGACCTTATGTAATATCAAAACCAGAAGTGACAGTGACCCAGCGAAGCAGCAAGGATGAATTTCTCATACTAGCAAGTGATGGATT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA