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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATGCCATTGCAATAGTTGTTGTGGTGTGGTTTAGTGCTGCTATTTGTTTTTTCATAGCATTGCCTAGCCAATCTTGGCTTTGGCTAATCTCCATCTTCAAgtaagctcactattccttgtcaaatcttttttacctatccacaaggatttgagtgttaaataagctctttagagtatttgtttaaaggtctaatgataca...

Basic information

species Glycine max
transcript GLYMA19G07740.1
intron # 4
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA19G07740.1 (Glycine max), 5'ss of exon 4
lower sequence: AT5G40670.1 (Arabidopsis thaliana), 5'ss of exon 4
ATGCCATTGCAATAGTTGTTGTGGTGTGGTTTAGTGCTGCTATTTGTTTTTTCATAGCATTGCCTAGCCAATCTTGGCTTTGGCTAATCTCCATCTTCAAgtaagctcactattccttgtcaaatcttttttacctatccacaaggatttgagtgttaaataagctctttaga--gtatttgtttaaaggtctaatgataca-
 ||| || |  || || ||||| ||||||     ||| ||||| ||||| ||||||||||| ||||  || |||||||| ||||| || || ||||||||||||| |     || |  |  ||  ||| |  ||| || |       ||| |||| |||   | |  ||| ||   || | |||||   ||  | || || | 
TTGCTATAGGTATTGTGGTTGTTGTGTGGGGATTTGCAGCTATCTGTTTCTTCATAGCATTACCTACACACTCTTGGCTATGGCTCATTTCAATCTTCAAgtaagtt----gttgc--gcaaagccttctgaaccaattc-------ttttagtggtaatctaacagttttgatgataatggtttatttgttcattgttatag