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ATGCCATTATAAGCTCCTTTGAAGACCCTGAGAAGATATTAGAACAAGCTGTGCTGGATATGAACAATGATTTGATCAAGGTTCGCCAAGCTACAGCACAggtatgttatgagtttgtcacaccttttattttattcacatttatattttgtgtctccctatcttgaggggtcaatctttatattccagcctgggtttta...
species | Glycine max |
transcript | GLYMA18G47890.1 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTGCTGGATATGAACAATGATTTGATCAAGGTTCGCCAAGCTACAGCACA GGTTCTAGCATCTCAAEST: gi|192306186|gb|FG995036.1|FG995036
genomic: GTGCTGGATATGAACAATGATTTGATCAAGGTTCGCCAAGCTACAGCACAggtatgttat ... attttctccaGGTTCTAGCATCTCAA
EST: GTGCTGGATATGAACAATGATTTGATCAAGGTTCGCCAAGCTACAGCACA GGTTCTAGCATCTCAAAAGCAGTTAGAAAGCAAGTACAAATCCATAGAAAAEST: gi|151412234|gb|EV282046.1|EV282046
genomic: GTGCTGGATATGAACAATGATTTGATCAAGGTTCGCCAAGCTACAGCACAggtatgttat ... attttctccaGGTTCTAGCATCTCAAAAGCAGTTAGAAAGCAAGTACAAATCCATAGAAAA
EST: GTGCTGGATATGAACAATGATTTGATCAAGGTTCGCCAAGCTACAGCACA GGTTCTAGCATCTCAAAAGCAGTTAGAAAGCAAGTACAAATCCATAGAAAAEST: gi|192294504|gb|FG987433.1|FG987433
genomic: GTGCTGGATATGAACAATGATTTGATCAAGGTTCGCCAAGCTACAGCACAggtatgttat ... attttctccaGGTTCTAGCATCTCAAAAGCAGTTAGAAAGCAAGTACAAATCCATAGAAAA
EST: GTGCTGGATATGAACAATGATTTGATCAAGGTTCGCCAAGCTACAGCACA GGTTCTAGCATCTCAAAAGCAGTTAGAAAGCAAGTACAAATCCATAGAAAAEST: gi|151398835|gb|EV268706.1|EV268706
genomic: GTGCTGGATATGAACAATGATTTGATCAAGGTTCGCCAAGCTACAGCACAggtatgttat ... attttctccaGGTTCTAGCATCTCAAAAGCAGTTAGAAAGCAAGTACAAATCCATAGAAAA
EST: GTGCTGGATATGAACAATGATTTGATCAAGGTCCGCCAAGCTACAGCACA GGTTCTAGCATCTCAAAAGCAGTTAGAAAGCAAGTACAAATCCATAGAAAA
genomic: GTGCTGGATATGAACAATGATTTGATCAAGGTTCGCCAAGCTACAGCACAggtatgttat ... attttctccaGGTTCTAGCATCTCAAAAGCAGTTAGAAAGCAAGTACAAATCCATAGAAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATGCCATTATAAGCTCCTTTGAAGACCCTGAGAAGATATTAGAACAAGCTGTGCTGGATATGAACAATGATTTGATCAAGGTTCGCCAAGCTACAGCACAggtatgttatgagtttgtcacaccttttattttattcacatttatattttgtgtctccctatcttgaggggtcaatctttatattccagcctgggtttta
- - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tccctatc