1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GAGATTTTTGTCTTAAAGATTTTGGCCTGATATCTGTTCCCGAAGTGTCATACAGGCGACTCACTGAGAAGGACGAATTTGTTGTCTTGGCAACAGATGGggtacaagacctatcttacattgccattgcacttgcctaccaagattttcattttctactcgcttttttcactctcatctcaagtttgttatttgttaatggca
species | Glycine max |
transcript | GLYMA18G47810.1 |
intron # | 4 |
splice site | 5' |
intron type | U2 |
EST: TGTTGTCTTGGCAACAGATGG GATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATCGTGGCAGCCGCEST: gi|11688925|gb|BF596663.1|BF596663
genomic: TGTTGTCTTGGCAACAGATGGggtacaagac ... gttaatggcaGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATCGTGGCAGCCGC
EST: TACAGGCGACTCACTGAGAAGGACGAATTTGTTGTCTTGGCAACAGATGG GATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATCGTGGCAGCCGCEST: gi|24205637|gb|BU964890.1|BU964890
genomic: TACAGGCGACTCACTGAGAAGGACGAATTTGTTGTCTTGGCAACAGATGGggtacaagac ... gttaatggcaGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATCGTGGCAGCCGC
EST: TACAGGCGACTCACTGAGAAGGACGAATTTGTTGTCTTGGCAACAGATGG GATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATCGTGGCAGCCGC
genomic: TACAGGCGACTCACTGAGAAGGACGAATTTGTTGTCTTGGCAACAGATGGggtacaagac ... gttaatggcaGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATCGTGGCAGCCGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGATTTTTGTCTTAAAGATTTTGGCCTGATATCTGTTCCCGAAGTGTCATACAGGCGACTCACTGAGAAGGACGAATTTGTTGTCTTGGCAACAGATGGggtacaagacctatcttacattgccattgcacttgcctaccaagattttcattttctactcgcttttttcactctcatctcaagtttgttatttgttaatggca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG