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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCATTCAGTTCGTGGTAGTGGTTCATCACGTAAACGAAGGCTGAAAAGCAGAAAAGATTCTATAAGTTTGTACCAGAAACCTAGCTTACCTGATAACAAGgtaaagcttttcattattgatctcgcctgcatttgggaagtttaacaccattgttattggtgagtgtctaaaagtccactttccagaagtgatcaagtga...

Basic information

species Glycine max
transcript GLYMA18G47560.1
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|27427347|gb|CA938867.1|CA938867
EST:     GAAAAGATTCTATAAGTTTGTACCAGAAACCTAGCTTACCTGATAACAAG                         TCAGCGAGCTGCAGGCCGCTTGGATCCACAAATGATTCCAAATTGAATTCT
genomic: GAAAAGATTCTATAAGTTTGTACCAGAAACCTAGCTTACCTGATAACAAGgtaaagcttt ... tgtattccagTCAGCGAGCTGCAGGCCGCTTGGATCCACAAATGATTCCAAATTGAATTCT
EST: gi|192304069|gb|FG995313.1|FG995313
EST:     GAAAAGATTCTATAAGTTTGTACCAGAAACCTAGCTTACCTGATAACAAG                         TCAGCGAGCTGCAGGCCGCTTGGATCCACAAATGATTCCAAATTGAATTCT
genomic: GAAAAGATTCTATAAGTTTGTACCAGAAACCTAGCTTACCTGATAACAAGgtaaagcttt ... tgtattccagTCAGCGAGCTGCAGGCCGCTTGGATCCACAAATGATTCCAAATTGAATTCT
EST: gi|6454664|gb|AW185347.1|AW185347
EST:     GAAAAGATTCTATAAGTTTGTACCAGAAACCTAGCTTACCTGATAACAAG                         TCAGCGAGCTGCAGGCCGCTTGGATCCACAAATGATTCCAAATTGAATTCT
genomic: GAAAAGATTCTATAAGTTTGTACCAGAAACCTAGCTTACCTGATAACAAGgtaaagcttt ... tgtattccagTCAGCGAGCTGCAGGCCGCTTGGATCCACAAATGATTCCAAATTGAATTCT
EST: gi|8403467|gb|BE059101.1|BE059101
EST:     GAAAAGATTCTATAAGTTTGTACCAGAAACCTAGCTTACCTGATAACAAG                         TCAGCGAGCTGCAGGCCGCTTGGATCCACAAATGATTCCAAATTGAATTCT
genomic: GAAAAGATTCTATAAGTTTGTACCAGAAACCTAGCTTACCTGATAACAAGgtaaagcttt ... tgtattccagTCAGCGAGCTGCAGGCCGCTTGGATCCACAAATGATTCCAAATTGAATTCT