Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATGAAGATGGTTTCTGGCTTCTTTGTTTTGCTCTTGGTGGTTGGAGCAACTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCCggtatatatatgtcttctttcctttattatcatttgttgtaactctttatttcatttgagaaaattagatctcttgcaataatgtaaatatcttcaactt...

Basic information

species Glycine max
transcript GLYMA17G35460.1
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|12774385|gb|BG239312.1|BG239312
EST:     CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCC                         GATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
genomic: CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCCggtatatata ... taccaaatcaGATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
EST: gi|22524796|gb|BU083607.1|BU083607
EST:     CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCC                         GATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
genomic: CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCCggtatatata ... taccaaatcaGATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
EST: gi|13791639|gb|BG654230.1|BG654230
EST:     CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCC                         GATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
genomic: CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCCggtatatata ... taccaaatcaGATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
EST: gi|24206041|gb|BU965294.1|BU965294
EST:     CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCC                         GATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
genomic: CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCCggtatatata ... taccaaatcaGATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
EST: gi|17964721|gb|BM271452.1|BM271452
EST:     CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCC                         GATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
genomic: CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCCggtatatata ... taccaaatcaGATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
EST: gi|151405125|gb|EV274939.1|EV274939
EST:     CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCC                         GATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
genomic: CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCCggtatatata ... taccaaatcaGATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
EST: gi|18730497|gb|BM525910.1|BM525910
EST:     CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCC                         GATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC
genomic: CTCTGTCGTTCCTTAACTTCTTAAGTCCCACTTCTGCCTCATGGTTTCCCggtatatata ... taccaaatcaGATTTCATTGCTACCAACTGTGATGATAAAGCCACATCGATTGCAGTAAGC