1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' |
GTGGCCCTCAAAATTAGACATGACAAAACGAACAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGAgtgagttttcaaacatcctttggctgctccccctctccaatcatgtcatgctcaatttgtcaagaaatgtgtgtaatttgtaattgatgccttttctcag...
species | Glycine max |
transcript | GLYMA17G35410.1 |
intron # | 11 |
splice site | 5' |
intron type | U2 |
EST: CAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGA AGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGTGACCACAAAAGGEST: gi|19270973|gb|BM887229.1|BM887229
genomic: CAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGAgtgagttttc ... tctggtgcagAGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGTGACCACAAAAGG
EST: CAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGA AGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGTGACCACAAAAGGEST: gi|193355617|gb|FK322960.1|FK322960
genomic: CAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGAgtgagttttc ... tctggtgcagAGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGTGACCACAAAAGG
EST: CAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGA AGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGTGACCACAGAAGGEST: gi|208047346|gb|GD847355.1|GD847355
genomic: CAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGAgtgagttttc ... tctggtgcagAGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGTGACCACAAAAGG
EST: CAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGA AGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGTEST: gi|6454744|gb|AW185427.1|AW185427
genomic: CAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGAgtgagttttc ... tctggtgcagAGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGT
EST: CAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGA AGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGTGACCACAAAAGG
genomic: CAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGAgtgagttttc ... tctggtgcagAGGGAAGTGTGCCGTTTGATTCCATCTTCCTCTAGTGACCACAAAAGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTGGCCCTCAAAATTAGACATGACAAAACGAACAGATCTTCGACATGTGAAATCAACATTTGCTGCTACTCCATCTCATAGAgtgagttttcaaacatcctttggctgctccccctctccaatcatgtcatgctcaatttgtcaagaaatgtgtgtaatttgtaattgatgccttttctcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ctccccc