1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
ACCTCGCCAAGAGGCTGTAACTGAGTATAGGGTGCTTGGTCCACAGATAAATGGATGCTCGTGGGTTGAGCTGCGTCCACTTACTTACCGAAAGCATCAGgtatcttggaaacaattttgttttctctattcaactgaattgttcatgtagagagagagagagagagtaaacacaatttccatctgtaaggatattcttg...
species | Glycine max |
transcript | GLYMA17G35030.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: ATGGATGCTCGTGGGTTGAGCTGCGTCCACTTACTTACCGAAAGCATCAG TTGCGTGTCCATTGTGCTGAAGCACTTGGCACACCGATAGTGGGTGACTATEST: gi|208187534|gb|GD985564.1|GD985564
genomic: ATGGATGCTCGTGGGTTGAGCTGCGTCCACTTACTTACCGAAAGCATCAGgtatcttgga ... ccttttccagTTGCGTGTCCATTGTGCTGAAGCACTTGGCACACCGATAGTGGGTGACTAT
EST: ATGGATGCTCGTGGGTTGAGCTGCGTCCACTTACTTACCGAAAGCATCAG TTGCGTGTCCATTGTGCTGAAGCACTTGGCACACCGEST: gi|7029209|gb|AW458992.1|AW458992
genomic: ATGGATGCTCGTGGGTTGAGCTGCGTCCACTTACTTACCGAAAGCATCAGgtatcttgga ... ccttttccagTTGCGTGTCCATTGTGCTGAAGCACTTGGCACACCG
EST: ATGGATGCTCGTGGGTTGAGCTGCGTCCACTTACTTACCGAAAGCATCAG TTGCGTGTCCATTGTGCTGAAGCACTTGGCACACCGATAGTGGGTGACTAT
genomic: ATGGATGCTCGTGGGTTGAGCTGCGTCCACTTACTTACCGAAAGCATCAGgtatcttgga ... ccttttccagTTGCGTGTCCATTGTGCTGAAGCACTTGGCACACCGATAGTGGGTGACTAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ACCTCGCCAAGAGGCTGTAACTGAGTATAGGGTGCTTGGTCCACAGATAAATGGATGCTCGTGGGTTGAGCTGCGTCCACTTACTTACCGAAAGCATCAGgtatcttggaaacaattttgttttctctattcaactgaattgttcatgtagagagagagagagagagtaaacacaatttccatctgtaaggatattcttg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggaaacaa