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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTCTTGTATGCGATCGTGGACTCACTCTCTGTGATTTAATAGGTGTTCTACACGATTTCTTCTCACGCTTAGgtaatgttctcttgtaaagaaaaagatttaaatgtggactgtaagttggactgttggagacttcaaggaatatgatccacatccaagtttatataggggacaggctttagtagtgtgattaatctattattgattttagctaatagaagtgatttcgttattgagttcag

Basic information

species Glycine max
transcript GLYMA17G34950.1
intron # 15
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|214006803|gb|DB987671.1|DB987671
EST:     TCTCTGTGATTTAATAGGTGTTCTACACGATTTCTTCTCACGCTTAG                         GCATGACCAAGCTGAAGTTCAAACCAGCTTACCATCCATACACTGAACCTA
genomic: TCTCTGTGATTTAATAGGTGTTCTACACGATTTCTTCTCACGCTTAGgtaatgttct ... ttgagttcagGCATGACCAAGCTGAAGTTCAAACCAGCTTACAATCCATACACTGAACCTA
EST: gi|13791361|gb|BG653952.1|BG653952
EST:     CACTCTCTGTGATTTAATAGGTGTTCTACACGATTTCTTCTCACGCTTAG                         GCATGACCAAGCTGAAGTTCAAACCAGCTTACAATCCATACACTGAACCTA
genomic: CACTCTCTGTGATTTAATAGGTGTTCTACACGATTTCTTCTCACGCTTAGgtaatgttct ... ttgagttcagGCATGACCAAGCTGAAGTTCAAACCAGCTTACAATCCATACACTGAACCTA