Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|9984815|gb|BE658923.1|BE658923EST: GGGTTTTCTCCTATTAAGAGANNNAGTTCATTAGACTTCAATGGGGCATG GTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
genomic: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATGgtatgtttaa ... atcctggtagGTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
EST:
gi|6201099|gb|AW153199.1|AW153199EST: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATG GTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
genomic: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATGgtatgtttaa ... atcctggtagGTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
EST:
gi|22539894|gb|BU089737.1|BU089737EST: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATG GTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
genomic: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATGgtatgtttaa ... atcctggtagGTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
EST:
gi|17023793|gb|BM094827.1|BM094827EST: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATG GTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
genomic: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATGgtatgtttaa ... atcctggtagGTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
EST:
gi|11274675|gb|BF325012.1|BF325012EST: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATG GTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
genomic: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATGgtatgtttaa ... atcctggtagGTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
EST:
gi|6951441|gb|AW423509.1|AW423509EST: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATG GTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
genomic: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATGgtatgtttaa ... atcctggtagGTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
EST:
gi|163923492|gb|EH039721.1|EH039721EST: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATG GTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
genomic: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATGgtatgtttaa ... atcctggtagGTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
EST:
gi|37997631|gb|CF809220.1|CF809220EST: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATG GTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
genomic: GGGTTTTCTCCTATTAAGAGACCTAGTTCATTAGACTTCAATGGGGCATGgtatgtttaa ... atcctggtagGTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGA
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.ccattattttttcatattaaaattatcgccttttatttgataatgatcctggtagGTTATTCAATTATGGCATTGGAATACACCTTCTTCAATCAGAAGACCCAGAAGGCATGCCCAAGCTTGTTCCAATTAATCCTAAGGACAACCACATTTCT
atttgat putative branch site (score: 5)
attttttcatattaaa TA-rich tract