Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|197661886|gb|FD480295.1|FD480295EST: CCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAG GGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
genomic: CCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAGgtacttccaa ... cattccacagGGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
EST:
gi|9258084|gb|BE346231.1|BE346231EST: CCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAG GGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
genomic: CCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAGgtacttccaa ... cattccacagGGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
EST:
gi|20811661|gb|BQ296139.1|BQ296139EST: CCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAG GGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
genomic: CCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAGgtacttccaa ... cattccacagGGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
EST:
gi|23728057|gb|BU762070.1|BU762070EST: CCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAG GGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
genomic: CCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAGgtacttccaa ... cattccacagGGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
EST:
gi|10234737|gb|BE803625.1|BE803625EST: CCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAG GGCTAGTGANAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
genomic: CCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAGgtacttccaa ... cattccacagGGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
EST:
gi|10845262|gb|BF068418.1|BF068418EST: GTGCCCTCAACTATACAG GGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
genomic: GTGCCCTCAACTATACAGgtacttccaa ... cattccacagGGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
EST:
gi|22541765|gb|BU091608.1|BU091608EST: CCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAN GGCTAGTGAAAATACTTTAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
genomic: CCATGGAGAGATGGTCTTGCTGGAAAACTACAGTGCCCTCAACTATACAGgtacttccaa ... cattccacagGGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTC
atgc intronic sequence ATGC exonic sequenceIntronic sequence truncated to 55 bases.aactattccattcctggtatctaattattacctcaattttcatttcattccacagGGCTAGTGAAAATACTTAAAAAGTATGACAAGAGAACCGGTGCTCTCATTCGCTTGCCCTTCATTCAGAAGGTCTTGCAACAACCTTTCTTTACCACTGA
atctaat putative branch site (score: 3)
ttttcatttcattcc putative PPT
aattttcatttcatt TA-rich tract