Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   		7  
 5'  3'   		8  
 5'  3'   		9  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCCACTAATCTTGCTCCATGGATGCTCACTGTTGCTGCCAGCTCAACTGATAGGGATTTCACTTCTGATATCATGTTGGGAAATGGTGCCAAAATCATGgtaaaacttattgactgttggcttgagtatattcttggtagttgaaaagtgttacattttgtttttatttgagcctagatataaagttttattggctttg...

Basic information

species Glycine max
transcript GLYMA16G22010.1
intron # 5
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA16G22010.1 (Glycine max), 5'ss of exon 5
lower sequence: Vv04s0044g01970.t01 (Vitis vinifera), 5'ss of exon 6
TGCCACTAATCTTGCTCCATGGATGCTCACTGTTGCTGCCAGCTCAACTGATAGGGATTTCACTTCTGATATCATGTTGGGAAATGGTGCCAAAATCATGgtaaaacttattgactgttggcttgagtatattct--tggtagttgaaaagtgttacattttgtttttatttgagcctagatataaagttttattggctttg
||| || || ||||||||||||||| |||||||||| || || ||||| ||||||||||| || ||||||||| | || ||| ||||||| ||  ||| |||||  ||  ||  ||  |    |  ||| |||       || |   |   | ||| |     | ||  ||   |  |||                      
TGCAACAAACCTTGCTCCATGGATGATCACTGTTGCCGCTAGTTCAACAGATAGGGATTTTACATCTGATATCGTATTAGGAGATGGTGCTAATTTCACGgtaatgctatttccctagtaatgtctgtagatttagacattaatcttaggctcttaaaacacttcttggttattgaatag----------------------