1 5' 3' | 2 5' 3' |
TCCTGACTCTTTTAGGATGCTCACTCGTTTACGTGTCCTGAAAGTGGAAGAGAATCCTCTTGAAATACCTCCAAGACATGTTGCTGAAAAGGGAGCACAGgtaactaactgcctttctcaatttaaccaggtttagggtgttcatattgctatttacaaacactgtttttagtttaaaaagaaaacatatactcactcta...
species | Glycine max |
transcript | GLYMA16G21580.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGAATCCTCTTGAAATACCTCCAAGACATGTTGCTGAAAAGGGAGCACAG GCTGTGGTCAGGTACATGGCTGATCTTGTTGAGAAGAAGGATGCTAAATTGEST: gi|6095253|gb|AW119920.1|AW119920
genomic: AGAATCCTCTTGAAATACCTCCAAGACATGTTGCTGAAAAGGGAGCACAGgtaactaact ... tgcatcgcagGCTGTGGTCAGGTACATGGCTGATCTTGTTGAGAAGAAGGATGCTAAATTG
EST: GAAATACCTCCAAGACATGTTGCTGAAAAGGGAGCACAG GCTGTGGTCAGGTACATGGCTGATCTTGTTGAGAAGAAGGATGCTAAATTG
genomic: GAAATACCTCCAAGACATGTTGCTGAAAAGGGAGCACAGgtaactaact ... tgcatcgcagGCTGTGGTCAGGTACATGGCTGATCTTGTTGAGAAGAAGGATGCTAAATTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCCTGACTCTTTTAGGATGCTCACTCGTTTACGTGTCCTGAAAGTGGAAGAGAATCCTCTTGAAATACCTCCAAGACATGTTGCTGAAAAGGGAGCACAGgtaactaactgcctttctcaatttaaccaggtttagggtgttcatattgctatttacaaacactgtttttagtttaaaaagaaaacatatactcactcta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaagaaaa