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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATCTGCAGAGTAGAAGATCTCAATCTCGAGAAGACCTGAATTCTTCATTGGCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTGgtatggttacactagtatcttcttgaaaattacagtttttataaacaaaccatttttttttcttttggttttgcttaatcaattcttcgtaggcattctt...

Basic information

species Glycine max
transcript GLYMA16G21210.1
intron # 4
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15663684|gb|BI701055.1|BI701055
EST:     GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTG                         CGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
genomic: GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTGgtatggttac ... catgtcccagCGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
EST: gi|58017706|gb|CX704448.1|CX704448
EST:     GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTG                         CGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
genomic: GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTGgtatggttac ... catgtcccagCGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
EST: gi|58020944|gb|CX707686.1|CX707686
EST:     GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTG                         CGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
genomic: GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTGgtatggttac ... catgtcccagCGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
EST: gi|254322711|gb|GR835533.1|GR835533
EST:     GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTG                         CGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
genomic: GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTGgtatggttac ... catgtcccagCGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
EST: gi|19270063|gb|BM886319.1|BM886319
EST:     GCTGAGACACACATGGTGGAGGCTTAGGGTGTGATCTTCTGAAAACTTTG                         CGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
genomic: GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTGgtatggttac ... catgtcccagCGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
EST: gi|254322710|gb|GR835532.1|GR835532
EST:     GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTG                         CGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
genomic: GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTGgtatggttac ... catgtcccagCGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
EST: gi|58014388|gb|CX701130.1|CX701130
EST:     GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTG                         CGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG
genomic: GCTGAGACACACATGGTGAAGGCTTAGGGTGTGATCTTCTGAAAACTTTGgtatggttac ... catgtcccagCGTTTCAGTTTTTGTCATGGAGATGACGACCACGGGGCTAAAGAAGAGTTG