1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AACTGCATTTTGTCTTCTGTACAAGTTTTTTACTATGAAGCTCACCGTCAAGCAAATGCACGGGCTGTTAAAGCACCCCGATTCTCCTTACATAAGAGCGgtgtgtacacgtgcctgacaatgaatatcggactttactgattttctgtttaggggtgaaaacattctgtgttcattatggtatgcttgtttgtgcctga...
species | Glycine max |
transcript | GLYMA14G39220.1 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: AGCAAATGCACGGGCTGTTAAAGCACCCCGATTCTCCTTACATAAGAGCG GTTGGATTTCTCTATCTGAGATATTGTGCTGATCCGAAGACACTATGGAATEST: gi|209705181|gb|BW673721.1|BW673721
genomic: AGCAAATGCACGGGCTGTTAAAGCACCCCGATTCTCCTTACATAAGAGCGgtgtgtacac ... ttgtttatagGTTGGATTTCTCTATCTGAGATATTGTGCTGATCCGAAGACACTATGGAAT
EST: AGCATATGCACGGGCTGTTAAAGCACCCCGATTCTCCTTACATAAGAGCG GTTGGATTTCTCTATCTGAGATATTGTGCTGATCCGAAGACACTATGGAATEST: gi|6455394|gb|AW186077.1|AW186077
genomic: AGCAAATGCACGGGCTGTTAAAGCACCCCGATTCTCCTTACATAAGAGCGgtgtgtacac ... ttgtttatagGTTGGATTTCTCTATCTGAGATATTGTGCTGATCCGAAGACACTATGGAAT
EST: AGCAAATGCACGGGCTGTTAAAGCACCCCGATTCTCCTTACATAAGAGCG GTTGGATTTCTCTATCTGAGATATTGTGCTGATCCGAAGACACTATGGAAT
genomic: AGCAAATGCACGGGCTGTTAAAGCACCCCGATTCTCCTTACATAAGAGCGgtgtgtacac ... ttgtttatagGTTGGATTTCTCTATCTGAGATATTGTGCTGATCCGAAGACACTATGGAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AACTGCATTTTGTCTTCTGTACAAGTTTTTTACTATGAAGCTCACCGTCAAGCAAATGCACGGGCTGTTAAAGCACCCCGATTCTCCTTACATAAGAGCGgtgtgtacacgtgcctgacaatgaatatcggactttactgattttctgtttaggggtgaaaacattctgtgttcattatggtatgcttgtttgtgcctga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ggggtga