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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TCAGCTTCTGGGTCGTGAAATCGTGCTCTGGTACGACAAGTCCATTTCCCAATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTGTCTgtgagtataactaaccgccaatccctcaactgaagcttctaataaaactaataaactaatatttgtcagaaaaaaaaaggacgtgtttggatactagtca...

Basic information

species Glycine max
transcript GLYMA12G08740.2
intron # 1
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|209719731|gb|BW669238.1|BW669238
EST:     AATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTGTCT                         GAAGGGAGGATTGATGAAGATGGGAAGTTGCAGTGTTCTTATCAT
genomic: AATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTGTCTgtgagtataa ... tttttggcagGAAGGGAGGATTGATGAAGATGGGAAGTTGCAGTGTTCTTATCAT
EST: gi|11412088|gb|BF424099.1|BF424099
EST:     AATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTGTCT                         GAAGGGAGGATTGATGAAGATGGGAAGTTGCAGTGTTCTTATCATGGGTGG
genomic: AATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTGTCTgtgagtataa ... tttttggcagGAAGGGAGGATTGATGAAGATGGGAAGTTGCAGTGTTCTTATCATGGGTGG
EST: gi|254333273|gb|GR850523.1|GR850523
EST:     AATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTGTCT                         GAAGGGAGGATTGATGAAGATGGGAAGTTGCAGTGTTCTTATCATGGGTGG
genomic: AATGGGTTGCTTTTGATGACAAATGCCCCCATCGTCTTGCCCCTTTGTCTgtgagtataa ... tttttggcagGAAGGGAGGATTGATGAAGATGGGAAGTTGCAGTGTTCTTATCATGGGTGG