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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtaagcaacaagccagcaaccaacagcagtgagtctacttaaaggataacctgaatgaattttctgttatttgactcctttgttagtctttgtttgagtttaaggctgcattgattagatagcctgttgacgattcaaatgataatattttgaaagtatgatggtgtctactcatatctcttgattctcattgcagGAGTAAAAAGGCTATCTTCTCCACTGTAGAAGCTGAAGAGATAGTTGAAATTATTATTTGTCTATTCCTAGATCGCCAATTTCAGGGTTTGTTGGTGCTT

Basic information

species Glycine max
transcript GLYMA12G08570.2
intron # 9
splice site 3'
intron type U2


 atgc   intronic sequence     ATGC   exonic sequence

Intronic sequence truncated to 55 bases.

ataatattttgaaagtatgatggtgtctactcatatctcttgattctcattgcagGAGTAAAAAGGCTATCTTCTCCACTGTAGAAGCTGAAGAGATAGTTGAAATTATTATTTGTCTATTCCTAGATCGCCAATTTCAGGGTTTGTTGGTGCTT
                                     tcttgat  putative branch site (score: 4)
                                           ttctcatt  CT-rich tract
     attttgaaa  TA-rich tract