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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATTTTTCTTGAAGGGTTACTAGTCAATGGTTGGCTTTCAAAATTAGCTTATCTGTGTGGTCATGTAGAAAAAACAGTAGCCATTTGGGCCTTCAACACAAgtgagtgaaagcatattgttaattgctttgagcatagcatcaatctttgtcatccatctgttttactttgttctttcag

Basic information

species Glycine max
transcript GLYMA12G08570.2
intron # 6
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA12G08570.2 (Glycine max), 5'ss of exon 6
lower sequence: Vv06s0061g00610.t01 (Vitis vinifera), 5'ss of exon 5
ATTTTTCTTGAAGGGTTACTAGTCAATGGTTGGCTTTCAAAATTAGCTTATCTGTGTGGTCATGTAGAAAAAACAGTAGCCATTTGGGCCTTCAACACAAgtgagtgaaagcatattgttaattgct---ttgagcatagcatcaatctttgtcatccatctgttttactttgttctttcag
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GCTTTTCTTGAAGGATTAATCGTAAATGGTTGGCTCTCTAAATTGGTTTTTATGTGTGGCCATGTAGAAAAATCAATTGCAATGTGGACCTTTAATTTGAgtgagtatatatttgttgctctctggtaatccatgagtagttttatgatgtttcatc-atgtcctgatatttggtttatcag