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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGAGCTTTTCATTGGCTATTACTGATGTATATGCCCTTTTAGTAAGGCGTTCTTTGCAGAACTATCGAATTGTCAGTTTGTTTACAATTGGTGACGGGgtaagatctatagtaagactcaataatccttttacaattttccaatggtaaaatatttgtcactttctagttaatttttaggattcccttcactttaaca...

Basic information

species Glycine max
transcript GLYMA12G08090.2
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|15813988|gb|BI786263.1|BI786263
EST:     GTTCTTTGCAGAACTATCGAATTGTCAGTTTGTTTACAATTGGTGACGGG                         GTCACTTCTACCCTTACATTTGCAGCAGCCTGTGCATCAGCAGGCATCACA
genomic: GTTCTTTGCAGAACTATCGAATTGTCAGTTTGTTTACAATTGGTGACGGGgtaagatcta ... ttccatacagGTCACTTCTACCCTTACATTTGCAGCAGCCTGTGCATCAGCAGGCATCACA
EST: gi|58018228|gb|CX704970.1|CX704970
EST:     GTTCTTTGCAGAACTATCGAATTGTCAGTTTGTTTACAATTGGTGACGGG                         GTCACTTCTACCCTTACATTTGCAGCAGCCTGTGCATCAGCAGGCATCACA
genomic: GTTCTTTGCAGAACTATCGAATTGTCAGTTTGTTTACAATTGGTGACGGGgtaagatcta ... ttccatacagGTCACTTCTACCCTTACATTTGCAGCAGCCTGTGCATCAGCAGGCATCACA
EST: gi|17021342|gb|BM092376.1|BM092376
EST:     GTTCTTTGCAGAACTATCGAATTGTCAGTTTGTTTACAATTGGTGACGGG                         GTCACTTCTACCCTTACATTTGCAGCAGCCTGTGCATCAGCAGGCATCACA
genomic: GTTCTTTGCAGAACTATCGAATTGTCAGTTTGTTTACAATTGGTGACGGGgtaagatcta ... ttccatacagGTCACTTCTACCCTTACATTTGCAGCAGCCTGTGCATCAGCAGGCATCACA
EST: gi|254323550|gb|GR835996.1|GR835996
EST:     G-TCTTTGCAGAACTATCGAATTGTCAGTTTGTTTACAATTGGTGACGGG                         GTCACTTCTACCCTTACATTTGCAGCAGCCTGTGCATCAGCAGGCATCACA
genomic: GTTCTTTGCAGAACTATCGAATTGTCAGTTTGTTTACAATTGGTGACGGGgtaagatcta ... ttccatacagGTCACTTCTACCCTTACATTTGCAGCAGCCTGTGCATCAGCAGGCATCACA
EST: gi|151404656|gb|EV274470.1|EV274470
EST:     GTTCTTTGCAGAACTATCGAATTGTCAGTTTGTTTACAATTGGTGACGGG                         GTCACTTCTACCCTTACATTTGCTGCAGCCTGTGCATCAGCAGGCATCACA
genomic: GTTCTTTGCAGAACTATCGAATTGTCAGTTTGTTTACAATTGGTGACGGGgtaagatcta ... ttccatacagGTCACTTCTACCCTTACATTTGCAGCAGCCTGTGCATCAGCAGGCATCACA