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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GATGCACTTAGCAAGCTTAGTCCTATACCATTGTTCACTGAACTCTTCAGAACTGATGGGGAACAGGTCCTTAAGTTTCCCACACCTAAAGTAATTCAAGgtagtacattaaaagcatattcctgatcctagcaatatttatattcataaataaacatggtaagctgatacatcttttgaaatgttttttatttggaacag

Basic information

species Glycine max
transcript GLYMA08G20230.1
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|192320018|gb|FK013346.1|FK013346
EST:     AACTGATGGGGAACAGGTCCTTAAGTTTCCCACACCTAAAGTAATTCAAG                         TGAATCTGTCTGGATGGATGACTGATGAAGAGTTTGCAAGAGAGATGATTG
genomic: AACTGATGGGGAACAGGTCCTTAAGTTTCCCACACCTAAAGTAATTCAAGgtagtacatt ... tttggaacagTGAATCTGTCTGGATGGATGACTGATGAAGAGTTTGCAAGAGAGATGATTG
EST: gi|192320019|gb|FK013347.1|FK013347
EST:     AACTGATGGGGAACAGGTCCTTAAGTTTCCCACACCTAAAGTAATTCAAG                         TGAATCTGTCTGGATGGATGACTGATGAAGAGTTTGCAAGAGAGATGATTG
genomic: AACTGATGGGGAACAGGTCCTTAAGTTTCCCACACCTAAAGTAATTCAAGgtagtacatt ... tttggaacagTGAATCTGTCTGGATGGATGACTGATGAAGAGTTTGCAAGAGAGATGATTG