1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
AATCATTTTTGCCTGGACGGTATTCTATCGAGATGTCTTCAGCTGTTTACAAGAATTGGGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAGgtaatcttactgaatataaaattactataagaaaaagataaaaataatgtatgcccttataattcatcaaatcataaatttttattatcttaaaagttat...
species | Glycine max |
transcript | GLYMA08G20220.1 |
intron # | 8 |
splice site | 5' |
intron type | U2 |
EST: AAGAATTGNGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAG AGGAATGGCAGTTGAGGATCCATCCTCTCCCCATGGCCTTCGTCTTGCGGTEST: gi|254317561|gb|GR826545.1|GR826545
genomic: AAGAATTGGGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAGgtaatcttac ... ctttattcagAGGAATGGCAGTTGAGGATCCATCCTCTCCCCATGGCCTTCGTCTTGCGGT
EST: AAGAATTGGGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAG AGGAATGGCAGTTGAGGATCCATCCTCTCCCCATGGCCTTCGTCTTGCGGTEST: gi|254340846|gb|GR854574.1|GR854574
genomic: AAGAATTGGGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAGgtaatcttac ... ctttattcagAGGAATGGCAGTTGAGGATCCATCCTCTCCCCATGGCCTTCGTCTTGCGGT
EST: AAGAATTGGGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAG AGGAATGGCAGTTGAGGATCCATCCTCTCCCCATGGCCTTCGTCTTGCGGTEST: gi|192328247|gb|FK020466.1|FK020466
genomic: AAGAATTGGGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAGgtaatcttac ... ctttattcagAGGAATGGCAGTTGAGGATCCATCCTCTCCCCATGGCCTTCGTCTTGCGGT
EST: AGAATTGGGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAG AGGAATGGCAGTTGAGGATCCATCCTCTCCCCATGGCCTTCGTCTTGCGGTEST: gi|254314752|gb|GR829745.1|GR829745
genomic: AGAATTGGGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAGgtaatcttac ... ctttattcagAGGAATGGCAGTTGAGGATCCATCCTCTCCCCATGGCCTTCGTCTTGCGGT
EST: AAGAATTGGGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAG AGGAATGGCAGTTGAGGATCCATCCTCTCCCCATGGCCTTCGTCTTGCGGT
genomic: AAGAATTGGGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAGgtaatcttac ... ctttattcagAGGAATGGCAGTTGAGGATCCATCCTCTCCCCATGGCCTTCGTCTTGCGGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATCATTTTTGCCTGGACGGTATTCTATCGAGATGTCTTCAGCTGTTTACAAGAATTGGGTTTTCACTGACCAAGCATTACCGGTCGATCTCATCAAGAGgtaatcttactgaatataaaattactataagaaaaagataaaaataatgtatgcccttataattcatcaaatcataaatttttattatcttaaaagttat
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaataa