1 5' 3' | 2 5' 3' |
CAAGCTCCTCTTGTCTGACTTTGTCAAAGTCAGCAAGGTCTCCGTCGAAGATATGCTTTTTGATGAACAGGACATCAATCGCTCCATGGATAAAATTGAGgttccaatttatcttttcttttcttactcctttccttagagaaaatgtacttatctttttagttcataacatttagcatttattaagggtattggtgaaa...
species | Glycine max |
transcript | GLYMA08G20140.1 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ATATGCTTTTTGATGAACAGGACATCAATCGCTCCATGGATAAAATTGAG GTTATTGATTTCCATCAAACAGTGGAAGTGAATGGTATTCGATTCTGGTGTEST: gi|6070136|gb|AW099706.1|AW099706
genomic: ATATGCTTTTTGATGAACAGGACATCAATCGCTCCATGGATAAAATTGAGgttccaattt ... gtgactgcagGTTATTGATTTCCATCAAACAGTGGAAGTGAATGGTATTCGATTCTGGTGT
EST: ATATGCTTTTTGATGAACAGGACATCAATCGCTCCATGGATAAAATTGAG GTTATTGATTTCCATCAAACAGTGGAAGTGAATGGTATTCGATTCTGGTGT
genomic: ATATGCTTTTTGATGAACAGGACATCAATCGCTCCATGGATAAAATTGAGgttccaattt ... gtgactgcagGTTATTGATTTCCATCAAACAGTGGAAGTGAATGGTATTCGATTCTGGTGT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAAGCTCCTCTTGTCTGACTTTGTCAAAGTCAGCAAGGTCTCCGTCGAAGATATGCTTTTTGATGAACAGGACATCAATCGCTCCATGGATAAAATTGAGgttccaatttatcttttcttttcttactcctttccttagagaaaatgtacttatctttttagttcataacatttagcatttattaagggtattggtgaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cctttcc