1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GATGTTGGTTCCACGCAGAAGTCTACTGCTGGGTGGCTTGCAGCTTTTCCTGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAGgcattttctacttgttcagctattggctatttgatcttttatttattttgtggtctagtgtcccacttgttatgttatgtctgaaatgaaacatgataat...
species | Glycine max |
transcript | GLYMA06G08850.1 |
intron # | 5 |
splice site | 5' |
intron type | U2 |
EST: TGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAG GTTGGATAGAGTGGGATGGCAAGAGGATTGAGTTTGATAACGCTCCTTCTTEST: gi|51341801|gb|CO983118.1|CO983118
genomic: TGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAGgcattttcta ... tggatctcagGTTGGATAGAGTGGGATGGCAAGAGGATTGAGTTTGATAACGCTCCTTCTT
EST: ACTGTCAACAG GTTGGATAGAGTGGGATGGCAAGAGGATTGAGTTTGATAACGCTCCTTCTTEST: gi|208103960|gb|GD902201.1|GD902201
genomic: ACTGTCAACAGgcattttcta ... tggatctcagGTTGGATAGAGTGGGATGGCAAGAGGATTGAGTTTGATAACGCTCCTTCTT
EST: TGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAG GTTGGATAGAGTGGGATGGCAAGAGGATTGAGTTTGATAACGCTCCTTCTTEST: gi|207734408|gb|GD712428.1|GD712428
genomic: TGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAGgcattttcta ... tggatctcagGTTGGATAGAGTGGGATGGCAAGAGGATTGAGTTTGATAACGCTCCTTCTT
EST: CAAATATGCATGGCTGGTGGACTGTCAACAG GTTGGATAGAGTGGGATGGCAAGAGGATTGAGTTTGATAACGCTCCTTCTTEST: gi|193417888|gb|FK382194.1|FK382194
genomic: CAAATATGCATGGCTGGTGGACTGTCAACAGgcattttcta ... tggatctcagGTTGGATAGAGTGGGATGGCAAGAGGATTGAGTTTGATAACGCTCCTTCTT
EST: TGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAG GTTGGATAGAGTGGGATGGCAAGAGGATTGAGTTTGATAACGCTCCTTCTT
genomic: TGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAGgcattttcta ... tggatctcagGTTGGATAGAGTGGGATGGCAAGAGGATTGAGTTTGATAACGCTCCTTCTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATGTTGGTTCCACGCAGAAGTCTACTGCTGGGTGGCTTGCAGCTTTTCCTGTTTTTGAACCACATTGGCAAATATGCATGGCTGGTGGACTGTCAACAGgcattttctacttgttcagctattggctatttgatcttttatttattttgtggtctagtgtcccacttgttatgttatgtctgaaatgaaacatgataat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGTGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaatgaaa