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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGAATATCGAGAAAACAATGATCTTTTAGATGTTTTTGCAAGCATGGACTGTCCAGATACTGTTCAGTATGGATTCCAGTATCTTTTGGATTATAACTGGgttagttgctgtcacccttaatctatgttcctgattcctgatgagtatctagaatgccttttgtttctaatgcactttttatccaatttttcgaatattc...

Basic information

species Glycine max
transcript GLYMA04G39780.1
intron # 9
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA04G39780.1 (Glycine max), 5'ss of exon 9
lower sequence: Vv07s0031g01490.t01 (Vitis vinifera), 5'ss of exon 10
AGAATATCGAGAAAACAATGATCTTTTAGATGTTTTTGCAAGCATGGACTGTCCAGATACTGTTCAGTATGGATTCCAGTATCTTTTGGATTATAACTGGgttagttgctgtcacccttaatctatgttcctgattc-ctgatgagtatctaga-atgccttttgtttctaatgcactttttatccaatttttcgaatattc
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AGAATGCAAGGCACAGAATGATGTTGTTGGGGTGTTTGCAAGTATGGACTGTCTTGATACTGTTCATTGTGGATTCCAGTACTTGCTAGAATACAACTGGgttagtt-ctgtcatcttaactctctctctctctctctctcacacacacacacacacaactggaatgcctaattc-tagattgcataaagcacccactgtgc