1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
TGGGACTGTGGTCTCCTACATTAAAGAATAAGATTATCTATGAAGATGGCTCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACTGAAGAGTATATACAAgtatgagatttatgatttcttaattaacccgaatttttcttcaatgtattcactctaactaaattttgtttgaacag
species | Glycine max |
transcript | GLYMA04G39500.1 |
intron # | 14 |
splice site | 5' |
intron type | U2 |
EST: TCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACCGAAGAGTATATACAA AACTGTTTGGGAGATTAAACAAAGGACATTGGEST: gi|193614757|gb|FK562795.1|FK562795
genomic: TCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACTGAAGAGTATATACAAgtatgagatt ... gtttgaacagAACTGTTTGGGAGATTAAACAAAGGACATTGG
EST: TCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACTGAAGAGTATATACAA AACTGTTTGGGAGATTAAACAAAGGACATTGGTAGATATGGCTGCTGATCGEST: gi|31311230|gb|CD396433.1|CD396433
genomic: TCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACTGAAGAGTATATACAAgtatgagatt ... gtttgaacagAACTGTTTGGGAGATTAAACAAAGGACATTGGTAGATATGGCTGCTGATCG
EST: TCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACTGAAGAGTATATACCA AACTGTTTGGGAGATTAAACCAAGGACATTGGTAGATATGGCTGCTGATCGEST: gi|6963924|gb|AW432617.1|AW432617
genomic: TCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACTGAAGAGTATATACAAgtatgagatt ... gtttgaacagAACTGTTTGGGAGATTAAACAAAGGACATTGGTAGATATGGCTGCTGATCG
EST: TCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACTGAAGAGTATATACAA AACTGTTTGGGAGATTAAACAAAGGACATTGGTAGATATGGCTGCTGATCGEST: gi|208204018|gb|GE006907.1|GE006907
genomic: TCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACTGAAGAGTATATACAAgtatgagatt ... gtttgaacagAACTGTTTGGGAGATTAAACAAAGGACATTGGTAGATATGGCTGCTGATCG
EST: TCAGTTCAGAAAATTCCAGAAATACCTGCTGTACTGAAGAGTATATACAA AACTGTTTGGGAGATTAAACAAAGGACATTGGTAGATATGGCTGCTGATCGEST: gi|193632339|gb|FK581923.1|FK581923
genomic: TCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACTGAAGAGTATATACAAgtatgagatt ... gtttgaacagAACTGTTTGGGAGATTAAACAAAGGACATTGGTAGATATGGCTGCTGATCG
EST: CTGCTGTACTGAAGAGTATATACAA AACTGTTTGGGAGATTAAACAAAGGACATTGGTAGATATGGCTGCTGATCGEST: gi|15199949|gb|BI424092.1|BI424092
genomic: CTGCTGTACTGAAGAGTATATACAAgtatgagatt ... gtttgaacagAACTGTTTGGGAGATTAAACAAAGGACATTGGTAGATATGGCTGCTGATCG
EST: TCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACTGAAGAGTATATACAA AACTGTTTGGGAGATTAAACAAAGGACATTGGTAGATATGGCTGCTGATCG
genomic: TCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACTGAAGAGTATATACAAgtatgagatt ... gtttgaacagAACTGTTTGGGAGATTAAACAAAGGACATTGGTAGATATGGCTGCTGATCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGGACTGTGGTCTCCTACATTAAAGAATAAGATTATCTATGAAGATGGCTCTGTTCAGAAAATTCCAGAAATGCCTGCTGTACTGAAGAGTATATACAAgtatgagatttatgatttcttaattaacccgaatttttcttcaatgtattcactctaactaaattttgtttgaacag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA