1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
...tggaatgtgtttgaaaaattataactttgtttctttggggttggggggttgatttccaccttgtatagttacacgttagttgtttttgttttgtggttagGATGATGGATGTGTGTACCTGGTCCTGGAGTTTTGTGCTGGAGGGAATCTTGCTTCTTATATTCAGAATCATGGGAGAGTTCAGCAACAAATAGCCAGAA
species | Glycine max |
transcript | GLYMA04G39350.3 |
intron # | 1 |
splice site | 3' |
intron type | U2 |
EST: TGTCCTCCGTTAACCACCCCAATATTATTCGCCTTCTTCACTTCTTCCAG GATGATGGATGTGTGTACCTGGTCCTGGAGTTTTGTGCTGGAGGGAATCTTEST: gi|17519292|gb|BM188334.1|BM188334
genomic: TGTCCTCCGTTAACCACCCCAATATTATTCGCCTTCTTCACTTCTTCCAGgttctctcct ... ttgtggttagGATGATGGATGTGTGTACCTGGTCCTGGAGTTTTGTGCTGGAGGGAATCTT
EST: TGTCCTCCGTTAACCACCCCAATATTATTCGCCTTCTTCACTTCTTCCAG GATGATGGATGTGTGTACCTGGTCCTGGAGTTTTGTGCTGGAGGGAATCTT
genomic: TGTCCTCCGTTAACCACCCCAATATTATTCGCCTTCTTCACTTCTTCCAGgttctctcct ... ttgtggttagGATGATGGATGTGTGTACCTGGTCCTGGAGTTTTGTGCTGGAGGGAATCTT
gggttgatttccaccttgtatagttacacgttagttgtttttgttttgtggttagGATGATGGATGTGTGTACCTGGTCCTGGAGTTTTGTGCTGGAGGGAATCTTGCTTCTTATATTCAGAATCATGGGAGAGTTCAGCAACAAATAGCCAGAA
ggttgat putative branch site (score: 5)
tttttgtttt putative PPT
tttttgtttt TA-rich tract