Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAATGATCTCTGCCTTGTCCACAAAACAACTACCGTATCCTAGTGAGTCATTTGAAATGATTCACTGTTCACGATGCCGAATAGACTTTCATGAAAACGgtaattggctttcaatattatgtttttatgattgcaactttaattctgcacatgagacaataaatgaagatgtgttgttacttgttacctatcttcaatg...

Basic information

species Glycine max
transcript GLYMA0024S00260.2
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GLYMA0024S00260.1 (Glycine max), 5'ss of exon 3
lower sequence: GRMZM2G015126_T01 (Zea mays), 5'ss of exon 3
GCAATGATCTCTGCCTTGTCCACAAAACAACTACCGTATCCTAGTGAGTCATTTGAAATGATTCACTGTTCACGATGCCGAATAGACTTTCATGAAAACGgtaa--ttggctttcaatattatgtttttatgattgcaactttaattctgcacatgagacaataaatgaagatgtgttgttacttgttacctatcttcaatg
|||||||||||||  ||| ||||||||||| |||| ||||||    | |||||||||||| ||||||||||| |||| ||  | || |  |||||||| |||||  ||  | ||| |  || |   |     | ||  ||   ||| ||    ||  | |   |  |   ||        ||||  |     || || ||  
GCAATGATCTCTGTGTTGGCCACAAAACAATTACCTTATCCTGAAAATTCATTTGAAATGGTTCACTGTTCAAGATGTCGTGTTGATTGGCATGAAAATGgtaagattcacgttctagtttgt-cctaagctactgacacaaaaatactttcaatttgtcctaagctactgacccaaaaatactcttcgttaatattaaaa-