1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GTCGGGGGCCAGGGAGATGCGGGCGGCGCAGACGCCGTCGTACTACAGCAACCTGCTTCGGGCGCAGGCGCTGTCGAAATCCACGGCGCAGGTCGAGCTGgtgggttggtgggtggggggcatggctactcggctgtgtggggactggggaggagcgtgtggcgcggcaggcgctggcgctggtggcgcaggcgcgagcg...
species | Chlamydomonas reinhardtii |
transcript | EDP08081 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: ACCTGCTTCGGGCGCAGGCGCTGTCGAAATCCACGGCGCAGGTCGAGCTG GACCTGCCACGCACCTTCCCCAACCACCCCTTTCTGGCTGCTGAGGAGGGCEST: gi|22055134|gb|BQ811688.1|BQ811688
genomic: ACCTGCTTCGGGCGCAGGCGCTGTCGAAATCCACGGCGCAGGTCGAGCTGgtgggttggt ... tcgtgtacagGACCTGCCACGCACCTTCCCCAACCACCCCTTTCTGGCTGCTGAGGAGGGC
EST: ACCTGCTTCGGGCGCAGGCGCTGTCGAAATCCACGGCGCAGGTCGAGCTG GACCTGCCACGCACCTTCCCCAACCACCCCTTTCTGGCTGCTGAGGAGGGC
genomic: ACCTGCTTCGGGCGCAGGCGCTGTCGAAATCCACGGCGCAGGTCGAGCTGgtgggttggt ... tcgtgtacagGACCTGCCACGCACCTTCCCCAACCACCCCTTTCTGGCTGCTGAGGAGGGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTCGGGGGCCAGGGAGATGCGGGCGGCGCAGACGCCGTCGTACTACAGCAACCTGCTTCGGGCGCAGGCGCTGTCGAAATCCACGGCGCAGGTCGAGCTGgtgggttggtgggtggggggcatggctactcggctgtgtggggactggggaggagcgtgtggcgcggcaggcgctggcgctggtggcgcaggcgcgagcg
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gcgtgtg