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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CATCCGGCTCATGGTGACGCGGGGGCTGAAGCCCACGCCCTACCAGAACCCCAACACCACCATCGGCAAGCCCACCATCGTAATCGTGCCCGAGTACAAGgtacggtatggctgctgaccccagctgtcccttgctgctgtccaagtccccttgctctagctttcaagcttctcacactctatttcctctgtgcaattcatcgcaacacag

Basic information

species Chlamydomonas reinhardtii
transcript EDP08065
intron # 8
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|16432528|gb|BI997754.1|BI997754
EST:     CCAACACCACCATCGGCAAGCCCACCATCGTAATCGTGCCCGAGTACAAG                         GAGGCCTCGCCGGTGCCGAGGGAGCGGGGCATAAGGCTGTTCACGGTGCAC
genomic: CCAACACCACCATCGGCAAGCCCACCATCGTAATCGTGCCCGAGTACAAGgtacggtatg ... cgcaacacagGAGGCCTCGCCGGTGCCGAGGGAGCGGGGCATAAGGCTGTTCACGGTGCAC
EST: gi|15696426|gb|BI720731.1|BI720731
EST:     CCAACACCACCATCGGCAAGCCCACCATCGTAATCGTGCCCGAGTACAAG                         GAGGCCTCGCCGGTGCCGAGGGAGCGGGGCATAAGGCTGTTCACGGTGCAC
genomic: CCAACACCACCATCGGCAAGCCCACCATCGTAATCGTGCCCGAGTACAAGgtacggtatg ... cgcaacacagGAGGCCTCGCCGGTGCCGAGGGAGCGGGGCATAAGGCTGTTCACGGTGCAC