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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GGGTGGCGGTCATGGCAGTCGACGGCTACGATGAGGTCGGCAAGTCCATTGCGGCACGTAGCGCGGgtgagccacgcgtagcatgtaggcgggaattgccctgctgggtcggcggtgctccctggctggcctgcatcgcccacccttgcgcgctcccgcccctgtgccgagagagtgcgtgcgtcctgcattgtcccacag

Basic information

species Chlamydomonas reinhardtii
transcript EDP06571
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|10774753|gb|AV625576.1|AV625576
EST:     AGTCGACGGCTACGATGAGGTCGGCAGGTCCATTGCGGCACGTAGCGCGG                         GCGCTGCCCGTGCGGAAAAGGCCGGTATGTTCATCTGGGCACC
genomic: AGTCGACGGCTACGATGAGGTCGGCAAGTCCATTGCGGCACGTAGCGCGGgtgagccacg ... tgtcccacagGCGCTGCCCGTGCGGAAAAGGCCGGTATGTTCATCTGGGCACC
EST: gi|10779000|gb|AV635680.1|AV635680
EST:     AGTCGACGGCTACGATGAGGTCGGCAGGTCCATTGCGGCACGTAGCGCGG                         GCGCTGCCCGTGCGGAAAAGGCCGGTATGTTCATCTGGGCACCCGTCTGGC
genomic: AGTCGACGGCTACGATGAGGTCGGCAAGTCCATTGCGGCACGTAGCGCGGgtgagccacg ... tgtcccacagGCGCTGCCCGTGCGGAAAAGGCCGGTATGTTCATCTGGGCACCCGTCTGGC