1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
GCTTTGGTGGTGGCGGGCTGTTTGGGGCGGTGCTGGGACTGGGCGGTGGCAGCGGCTACGTGACCGGCATGAACCGCAAATGGCACCCGGACTGTTTCAAgtgagtgtcggagtggcggggttgtggcgccgggtgtcggggtgcactgggcgcgtgtgggtttgtcgtggttagagggcagagcggggcgcattcatgt...
species | Chlamydomonas reinhardtii |
transcript | EDP06520 |
intron # | 1 |
splice site | 5' |
intron type | U2 |
EST: GGCATGAACCGCAAATGGCACCCGGACTGTTTCAA GTGCGGCTTCTGTGCCGAGCCCATCAGCTCGGGCCGCGGCGCCTTCTCCTAEST: gi|22066002|gb|BQ816693.1|BQ816693
genomic: GGCATGAACCGCAAATGGCACCCGGACTGTTTCAAgtgagtgtcg ... gcgcctgcagGTGCGGCTTCTGTGCCGAGCCCATCAGCTCGGGCCGCGGCGCCTTCTCCTA
EST: AGCGGCTACGTGACCGGCATGAACCGCAAATGGCACCCGGACTGTTTCAA GTGCGGCTTCTGTGCCGAGCCCATCAGC
genomic: AGCGGCTACGTGACCGGCATGAACCGCAAATGGCACCCGGACTGTTTCAAgtgagtgtcg ... gcgcctgcagGTGCGGCTTCTGTGCCGAGCCCATCAGC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTTTGGTGGTGGCGGGCTGTTTGGGGCGGTGCTGGGACTGGGCGGTGGCAGCGGCTACGTGACCGGCATGAACCGCAAATGGCACCCGGACTGTTTCAAgtgagtgtcggagtggcggggttgtggcgccgggtgtcggggtgcactgggcgcgtgtgggtttgtcgtggttagagggcagagcggggcgcattcatgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgtcgga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - gttgtgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cgggtgt
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- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - cgtggtt