1 5' 3' | 2 5' 3' | 3 5' 3' |
...tgcattggggtcctggtctatgtcgacctgcgctgtgactgacctttgcatccacgggtctactcccgacatcctgccctcctggcacatgccccagcagGTCACGCTGGAGGAAAAGAAGAAAAGCTGACTAGCAGTGGCCGGCGAGGCGGGCATCGCGGCCCTCCGTCTCTGCGGCCCGGTGCTGGTCCTGCGTGCGG
species | Chlamydomonas reinhardtii |
transcript | EDP06426 |
intron # | 3 |
splice site | 3' |
intron type | U2 |
EST: AGGACGCCACGTACACGGCGCCCGTCCGTGTACGCGGCGACCTCATGCCG GTCACGCTGGAGGAAAAGAAGAAAAGCTGACTAGCAGTGGCCGGCGAGGCGEST: gi|9210048|gb|BE336963.1|BE336963
genomic: AGGACGCCACGTACACGGCGCCCGTCCGTGTACGCGGCGACCTCATGCCGgtgagcaacc ... gccccagcagGTCACGCTGGAGGAAAAGAAGAAAAGCTGACTAGCAGTGGCCGGCGAGGCG
EST: CGTCCGTGTACGCGGCGACCTCATGCCG GTCACGCTGGAGGAAAAGAAGAAAAGCTGACTAGCAGTGGCCGGCGAGGCG
genomic: CGTCCGTGTACGCGGCGACCTCATGCCGgtgagcaacc ... gccccagcagGTCACGCTGGAGGAAAAGAAGAAAAGCTGACTAGCAGTGGCCGGCGAGGCG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| tgcattggggtcctggtctatgtcgacctgcgctgtgactgacctttgcatccacgggtctactcccgacatcctgccctcctggcacatgccccagcagGTCACGCTGGAGGAAAAGAAGAAAAGCTGACTAGCAGTGGCCGGCGAGGCGGGCATCGCGGCCCTCCGTCTCTGCGGCCCGGTGCTGGTCCTGCGTGCGG
- - - - - - - - tctatgt
- - - - - - - - - - - - - - - - - - - - - - - - catccac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ggcacat