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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGGCCATGATCGACGACGGCGAGCTGGACTGGAAGGTCATCGCCATCTCCGCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaagcgctacccccggggctgggtcggcgttggggccaggggagtggcaaggggcgggtgcaagtgggcaaggggaccagacaacgaacatggc...

Basic information

species Chlamydomonas reinhardtii
transcript EDP06356
intron # 6
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|161821684|gb|FC108159.1|FC108159
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|14226089|gb|BG844905.1|BG844905
EST:     GCTGACGACCCGAAGGCGGCTTTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAAAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|16072882|gb|BI874878.1|BI874878
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|23363704|gb|BU651524.1|BU651524
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|7427240|gb|AW661406.1|AW661406
EST:     GGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161800502|gb|FC085516.1|FC085516
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|10786415|gb|AV643087.1|AV643087
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161792222|gb|FC079201.1|FC079201
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|23361718|gb|BU649538.1|BU649538
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161818299|gb|FC101953.1|FC101953
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161797833|gb|FC086620.1|FC086620
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161806988|gb|FC091770.1|FC091770
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|10127738|gb|BE726442.1|BE726442
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|22070112|gb|BQ819542.1|BQ819542
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|7616264|gb|AW721704.1|AW721704
EST:     GACCCGAAGGCGGCTTTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|14242079|gb|BG860895.1|BG860895
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161796155|gb|FC082588.1|FC082588
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|16073222|gb|BI875218.1|BI875218
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|15370500|gb|BI529926.1|BI529926
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTT-CCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACA
EST: gi|22070111|gb|BQ819541.1|BQ819541
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|10127425|gb|BE726129.1|BE726129
EST:     GCTGCCGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|34990023|gb|CF563940.1|CF563940
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161795534|gb|FC081460.1|FC081460
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|23365147|gb|BU652967.1|BU652967
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|15368812|gb|BI528238.1|BI528238
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161809561|gb|FC096566.1|FC096566
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|49460503|gb|BP088416.1|BP088416
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTA
EST: gi|23358114|gb|BU645934.1|BU645934
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|15368106|gb|BI527532.1|BI527532
EST:     TCGAGAACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: TCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161811068|gb|FC097156.1|FC097156
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161803094|gb|FC091865.1|FC091865
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|23361717|gb|BU649537.1|BU649537
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161814334|gb|FC103725.1|FC103725
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|10773792|gb|AV624615.1|AV624615
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161802336|gb|FC092108.1|FC092108
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACNA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|49461307|gb|BP089220.1|BP089220
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCAGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|14239572|gb|BG858388.1|BG858388
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAAAA                         GCACTTCCCGGGTGAGATCCAAAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|34982093|gb|CF556010.1|CF556010
EST:     GTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|14239573|gb|BG858389.1|BG858389
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|14237989|gb|BG856805.1|BG856805
EST:     GCTAACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCCCTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|161816877|gb|FC101363.1|FC101363
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCC
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCC
EST: gi|16071853|gb|BI873849.1|BI873849
EST:     GACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|23360859|gb|BU648679.1|BU648679
EST:     CTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: CTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
EST: gi|8932628|gb|BE227389.1|BE227389
EST:     GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAA                         GCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA
genomic: GCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaag ... tgcgttgcagGCACTTCCCGGGTGAGATCCAGAAGGTCCTGGAGTGGTTCCGGGACTACAA

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TGGCCATGATCGACGACGGCGAGCTGGACTGGAAGGTCATCGCCATCTCCGCTGACGACCCGAAGGCGGCTCTGTGCAACGACGTCGAGGACGTGGAGAAgtgagtaaagcgctacccccggggctgggtcggcgttggggccaggggagtggcaaggggcgggtgcaagtgggcaaggggaccagacaacgaacatggc

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gctgggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgcaagt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - ccagaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -acgaaca