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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCGACGAGAGTGAAGTGATGATGGACGCACACACGCAGGCTGGGTTCATTGTGGGAGTGCCCTTCGCCGCCAAGgtgcgtgcgacgtacatggccgcacggcgctggtgtgtgtcctgggcgggcacacaatccccaacaacacacaagccaccaagcctccctgcccttgcctcccacccccaaattagcccataggtttgaaccctaccttacatgccgaacccgtcgctcgtgttgacctctctttctttcag

Basic information

species Chlamydomonas reinhardtii
transcript EDP06299
intron # 9
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|23366770|gb|BU654589.1|BU654589
EST:     ACGCACACACGCAGGCTGGGTTCATTGTGGGAGTGCCCTTCGCCGCCAAG                         GGCTTGTATGACTTCGGCTCGCACGGCGGCATGACCAGCCGCGTCAGCGAG
genomic: ACGCACACACGCAGGCTGGGTTCATTGTGGGAGTGCCCTTCGCCGCCAAGgtgcgtgcga ... tttctttcagGGCTTGTATGACTTCGGCTCGCACGGCGGCATGACCAGCCGCGTCAGCGAG
EST: gi|10772676|gb|AV623499.1|AV623499
EST:     ACGCACACACGCAGGCTGGGTTCATTGTGGGAGTGCCCTTCGCCGACAAG                         GGCTTGTATGACTTCGGCTCGCACG
genomic: ACGCACACACGCAGGCTGGGTTCATTGTGGGAGTGCCCTTCGCCGCCAAGgtgcgtgcga ... tttctttcagGGCTTGTATGACTTCGGCTCGCACG