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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

gtgagctgccgcggcggggccgtgcgacggacactgtgcgtttgcgatgtgacgtgtgggagggaggaaaggcatcgtttgcaaaggcatatcaactcgcccgatgtcacaccaaagcggacatctctgcatgatctgcatgatgtgcagGCAAGCCCCTGAACATGATCGTCAGCCGCACGCCTGAGAAGTACAGCAGCGCGGCGCCACTCACCGCGGACGCCCGCCAGCGCATCGTCAGCGAG

Basic information

species Chlamydomonas reinhardtii
transcript EDP05906
intron # 3
splice site 3'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9027735|gb|BE237775.1|BE237775
EST:     CGACCCCATCCTGGCCTACACCTACCAGTACCCCATCGTCACCACCATGG                         GCAAGCCCCTGAACATGATCGTCAGCCGCACGCCTGAGAAGTACAGCAGCG
genomic: CGACCCCATCCTGGCCTACACCTACCAGTACCCCATCGTCACCACCATGGgtgagctgcc ... tgatgtgcagGCAAGCCCCTGAACATGATCGTCAGCCGCACGCCTGAGAAGTACAGCAGCG
EST: gi|15692965|gb|BI717270.1|BI717270
EST:     CGACCCCATCCTGGCCTACACCTACCAGTACCCCATCGTCACCACCATGG                         GCAAGCCCCTGAACATGATCGTCAGCCGCACGCCTGAGAAGTACAGCAGCG
genomic: CGACCCCATCCTGGCCTACACCTACCAGTACCCCATCGTCACCACCATGGgtgagctgcc ... tgatgtgcagGCAAGCCCCTGAACATGATCGTCAGCCGCACGCCTGAGAAGTACAGCAGCG
EST: gi|14238276|gb|BG857092.1|BG857092
EST:     CGACCCCATCCTGGCCTACACCTACCAGTACCCCATCGTCACCACCATGG                         GCAAGCCCCTGAACATGATCGTCAGCCGCACGCCTGAGAAGTACAGCAGCG
genomic: CGACCCCATCCTGGCCTACACCTACCAGTACCCCATCGTCACCACCATGGgtgagctgcc ... tgatgtgcagGCAAGCCCCTGAACATGATCGTCAGCCGCACGCCTGAGAAGTACAGCAGCG
EST: gi|6546010|gb|AV391794.1|AV391794
EST:     CGACCCCATCCTGGCCTACACCTACCAGTACCCCATCGTCACCACCATGG                         GCAAGCCCCTGAACATGATCGTCAGCCGCACGCCTGAGAAGTACAGCAGCG
genomic: CGACCCCATCCTGGCCTACACCTACCAGTACCCCATCGTCACCACCATGGgtgagctgcc ... tgatgtgcagGCAAGCCCCTGAACATGATCGTCAGCCGCACGCCTGAGAAGTACAGCAGCG
EST: gi|14235843|gb|BG854659.1|BG854659
EST:     CGACCCCATCCTGGCCTACACCTACCAGTACCCCATCGTCACCACCATGG                         GCAAGCCCCTGAACATGATCGTCAGCCGCACGCCTGAGAAGTACAGCAGCG
genomic: CGACCCCATCCTGGCCTACACCTACCAGTACCCCATCGTCACCACCATGGgtgagctgcc ... tgatgtgcagGCAAGCCCCTGAACATGATCGTCAGCCGCACGCCTGAGAAGTACAGCAGCG