1 5' 3' | 2 5' 3' | 3 5' 3' |
CGGAATGCACCATGGCTTGCGCACGCTACGCTACCAATTTTCCCGATTCGGAGCATATGATCATCTGGGACGTGCCGGGTGCCGGCACCGAGAAGCACACgtaagtggcagctgacttgcggctacaggcgctgcccgtttagcccccgccacacaccctcctggctgtggcgaccgagcggcggcagcagggtgcaatg...
species | Chlamydomonas reinhardtii |
transcript | EDP05759 |
intron # | 2 |
splice site | 5' |
intron type | U2 |
EST: GAGCATATGATCATCTGGGACGTGCCGGGTGCCGGCACCGAGAAGCACAC CGCCGCCAGCTACTACCAGGACAAGGCGCTGTACGCCTTTGACTGCCTCATEST: gi|15371818|gb|BI531244.1|BI531244
genomic: GAGCATATGATCATCTGGGACGTGCCGGGTGCCGGCACCGAGAAGCACACgtaagtggca ... ccttctgcagCGCCGCCAGCTACTACCAGGACAAGGCGCTGTACGCCTTTGACTGCCTCAT
EST: GAGCATATGATCATCTGGGACGTGCCGGGTGCCGGCACCGAGAAGCACAC CGCCGCCAGCTACTACCAGGACAAGGCGCTGTACGCCTTTGAC
genomic: GAGCATATGATCATCTGGGACGTGCCGGGTGCCGGCACCGAGAAGCACACgtaagtggca ... ccttctgcagCGCCGCCAGCTACTACCAGGACAAGGCGCTGTACGCCTTTGAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGGAATGCACCATGGCTTGCGCACGCTACGCTACCAATTTTCCCGATTCGGAGCATATGATCATCTGGGACGTGCCGGGTGCCGGCACCGAGAAGCACACgtaagtggcagctgacttgcggctacaggcgctgcccgtttagcccccgccacacaccctcctggctgtggcgaccgagcggcggcagcagggtgcaatg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -tgcggct
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tgcccgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -ccacaca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - tggctgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gcagggt