Mapped EST sequences
Showing partial alignments of ESTs and genomic sequences. See full alignments
ATGC EST sequence
ATGC genomic sequence (exon)
ATGC genomic sequence (truncated intron)
EST:
gi|22064173|gb|BQ815659.1|BQ815659EST: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAG GAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
genomic: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAGgtgacagcgc ... taccccacagGAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
EST:
gi|161807147|gb|FC089342.1|FC089342EST: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAG GAGTTCCACGCCAAG
genomic: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAGgtgacagcgc ... taccccacagGAGTTCCACGCCAAG
EST:
gi|49458448|gb|BP086361.1|BP086361EST: GCTGGCGCTGTTCATGAAG GAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
genomic: GCTGGCGCTGTTCATGAAGgtgacagcgc ... taccccacagGAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
EST:
gi|161811994|gb|FC096184.1|FC096184EST: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAG GAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACC
genomic: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAGgtgacagcgc ... taccccacagGAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACC
EST:
gi|14232886|gb|BG851702.1|BG851702EST: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAG GAGTTCCACGCCAAGCACGCCAAGTAAGC
genomic: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAGgtgacagcgc ... taccccacagGAGTTCCACGCCAAGCACGCCAAGTAAGC
EST:
gi|161803775|gb|FC093521.1|FC093521EST: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAG GAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCA-G
genomic: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAGgtgacagcgc ... taccccacagGAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
EST:
gi|161817443|gb|FC101656.1|FC101656EST: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAG GAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
genomic: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAGgtgacagcgc ... taccccacagGAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
EST:
gi|161805648|gb|FC093616.1|FC093616EST: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAG GAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
genomic: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAGgtgacagcgc ... taccccacagGAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
EST:
gi|14233751|gb|BG852567.1|BG852567EST: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAG GAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
genomic: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAGgtgacagcgc ... taccccacagGAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
EST:
gi|161819271|gb|FC109321.1|FC109321EST: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAG GAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
genomic: ACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAGgtgacagcgc ... taccccacagGAGTTCCACGCCAAGCACGCCAAGTAAGCGGCTTGCTCAGCTGCACCCAAG
Putative cis-regulatory sequences
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
| | ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|
CTCCAACTCAAGGGCCACCGCTCCGTGGGCGGCATGCGCGCCTCCATCTACAACGCCATGCCCATCGAGGGCGTGCAGAAGCTGGCGCTGTTCATGAAGgtgacagcgcgaggaggcagggggagggaggagggaggggaaggaggcagaagggaggagggggagggaggggaggcaggcgagagcgaggtcggagcgg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT